Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZFYVE28Q9HCC9 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZFYVE28Q9HCC9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZFYVE28Q9HCC9 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.71■■□□□ 1.07
ZFYVE28Q9HCC9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.71■■□□□ 1.07
ZFYVE28Q9HCC9 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ZFYVE28Q9HCC9 LINC00167-201ENST00000530583 1419 ntBASIC21.71■■□□□ 1.07
ZFYVE28Q9HCC9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.71■■□□□ 1.07
ZFYVE28Q9HCC9 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ZFYVE28Q9HCC9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.7■■□□□ 1.07
ZFYVE28Q9HCC9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZFYVE28Q9HCC9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ZFYVE28Q9HCC9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZFYVE28Q9HCC9 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZFYVE28Q9HCC9 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.7■■□□□ 1.06
ZFYVE28Q9HCC9 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ZFYVE28Q9HCC9 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
ZFYVE28Q9HCC9 AC005332.3-201ENST00000589904 676 ntBASIC21.7■■□□□ 1.06
ZFYVE28Q9HCC9 Z69720.1-201ENST00000601483 472 ntBASIC21.7■■□□□ 1.06
ZFYVE28Q9HCC9 NME4-212ENST00000621774 904 ntTSL 3 BASIC21.7■■□□□ 1.06
ZFYVE28Q9HCC9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.7■■□□□ 1.06
ZFYVE28Q9HCC9 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.7■■□□□ 1.06
ZFYVE28Q9HCC9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
ZFYVE28Q9HCC9 AC233702.3-201ENST00000578656 1387 ntBASIC21.7■■□□□ 1.06
ZFYVE28Q9HCC9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZFYVE28Q9HCC9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
ZFYVE28Q9HCC9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
ZFYVE28Q9HCC9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZFYVE28Q9HCC9 AL691432.2-201ENST00000607222 2038 ntBASIC21.69■■□□□ 1.06
ZFYVE28Q9HCC9 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZFYVE28Q9HCC9 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZFYVE28Q9HCC9 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.69■■□□□ 1.06
ZFYVE28Q9HCC9 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZFYVE28Q9HCC9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZFYVE28Q9HCC9 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.69■■□□□ 1.06
ZFYVE28Q9HCC9 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.69■■□□□ 1.06
ZFYVE28Q9HCC9 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ZFYVE28Q9HCC9 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.69■■□□□ 1.06
ZFYVE28Q9HCC9 AC064862.7-201ENST00000604520 867 ntBASIC21.69■■□□□ 1.06
ZFYVE28Q9HCC9 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.69■■□□□ 1.06
ZFYVE28Q9HCC9 AF228730.7-201ENST00000641842 219 ntBASIC21.69■■□□□ 1.06
ZFYVE28Q9HCC9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZFYVE28Q9HCC9 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ZFYVE28Q9HCC9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.69■■□□□ 1.06
ZFYVE28Q9HCC9 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZFYVE28Q9HCC9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ZFYVE28Q9HCC9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ZFYVE28Q9HCC9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
ZFYVE28Q9HCC9 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.68■■□□□ 1.06
ZFYVE28Q9HCC9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ZFYVE28Q9HCC9 TSPY12P-201ENST00000421279 868 ntBASIC21.68■■□□□ 1.06
ZFYVE28Q9HCC9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.68■■□□□ 1.06
ZFYVE28Q9HCC9 AP003733.1-201ENST00000491725 852 ntBASIC21.68■■□□□ 1.06
ZFYVE28Q9HCC9 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.68■■□□□ 1.06
ZFYVE28Q9HCC9 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.68■■□□□ 1.06
ZFYVE28Q9HCC9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.68■■□□□ 1.06
ZFYVE28Q9HCC9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.68■■□□□ 1.06
ZFYVE28Q9HCC9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZFYVE28Q9HCC9 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.68■■□□□ 1.06
ZFYVE28Q9HCC9 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.68■■□□□ 1.06
ZFYVE28Q9HCC9 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.68■■□□□ 1.06
ZFYVE28Q9HCC9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ZFYVE28Q9HCC9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ZFYVE28Q9HCC9 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ZFYVE28Q9HCC9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZFYVE28Q9HCC9 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
ZFYVE28Q9HCC9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.68■■□□□ 1.06
ZFYVE28Q9HCC9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 ZNF815P-204ENST00000434898 1737 ntBASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 MIR574-201ENST00000385209 96 ntBASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 AC020907.5-201ENST00000624372 1936 ntBASIC21.67■■□□□ 1.06
ZFYVE28Q9HCC9 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
ZFYVE28Q9HCC9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
ZFYVE28Q9HCC9 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.66■■□□□ 1.06
ZFYVE28Q9HCC9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZFYVE28Q9HCC9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms