Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AL355075.4-201ENST00000554988 638 ntBASIC18.93■□□□□ 0.62
TRIM4Q9C037 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM4Q9C037 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM4Q9C037 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TRIM4Q9C037 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.93■□□□□ 0.62
TRIM4Q9C037 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM4Q9C037 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM4Q9C037 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM4Q9C037 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM4Q9C037 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM4Q9C037 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM4Q9C037 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM4Q9C037 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM4Q9C037 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM4Q9C037 AC012313.1-201ENST00000593393 3059 ntBASIC18.92■□□□□ 0.62
TRIM4Q9C037 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM4Q9C037 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM4Q9C037 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM4Q9C037 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TRIM4Q9C037 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM4Q9C037 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TRIM4Q9C037 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM4Q9C037 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRIM4Q9C037 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM4Q9C037 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM4Q9C037 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM4Q9C037 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.92■□□□□ 0.62
TRIM4Q9C037 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.92■□□□□ 0.62
TRIM4Q9C037 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
TRIM4Q9C037 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM4Q9C037 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM4Q9C037 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM4Q9C037 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM4Q9C037 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM4Q9C037 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM4Q9C037 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM4Q9C037 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.91■□□□□ 0.62
TRIM4Q9C037 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM4Q9C037 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM4Q9C037 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM4Q9C037 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM4Q9C037 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM4Q9C037 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM4Q9C037 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM4Q9C037 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM4Q9C037 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM4Q9C037 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.91■□□□□ 0.62
TRIM4Q9C037 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM4Q9C037 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM4Q9C037 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM4Q9C037 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM4Q9C037 AC100791.3-201ENST00000617619 330 ntBASIC18.91■□□□□ 0.62
TRIM4Q9C037 AL590326.2-201ENST00000625139 305 ntBASIC18.91■□□□□ 0.62
TRIM4Q9C037 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM4Q9C037 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM4Q9C037 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM4Q9C037 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM4Q9C037 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM4Q9C037 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM4Q9C037 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM4Q9C037 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.91■□□□□ 0.62
TRIM4Q9C037 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM4Q9C037 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM4Q9C037 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TRIM4Q9C037 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM4Q9C037 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TRIM4Q9C037 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM4Q9C037 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM4Q9C037 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM4Q9C037 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM4Q9C037 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM4Q9C037 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM4Q9C037 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM4Q9C037 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM4Q9C037 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM4Q9C037 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM4Q9C037 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM4Q9C037 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM4Q9C037 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM4Q9C037 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM4Q9C037 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM4Q9C037 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM4Q9C037 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM4Q9C037 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM4Q9C037 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM4Q9C037 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.9■□□□□ 0.62
TRIM4Q9C037 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM4Q9C037 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM4Q9C037 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM4Q9C037 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.89■□□□□ 0.62
TRIM4Q9C037 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRIM4Q9C037 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM4Q9C037 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM4Q9C037 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM4Q9C037 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM4Q9C037 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM4Q9C037 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM4Q9C037 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM4Q9C037 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.89■□□□□ 0.61
TRIM4Q9C037 PGM5P4-201ENST00000421970 445 ntBASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms