Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
CASKIN1Q8WXD9 AL121894.2-201ENST00000602977 491 ntBASIC29.55■■■□□ 2.32
CASKIN1Q8WXD9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
CASKIN1Q8WXD9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
CASKIN1Q8WXD9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CASKIN1Q8WXD9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
CASKIN1Q8WXD9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CASKIN1Q8WXD9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CASKIN1Q8WXD9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
CASKIN1Q8WXD9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
CASKIN1Q8WXD9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CASKIN1Q8WXD9 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CASKIN1Q8WXD9 BCL10-202ENST00000620248 774 ntTSL 5 BASIC29.54■■■□□ 2.32
CASKIN1Q8WXD9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
CASKIN1Q8WXD9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CASKIN1Q8WXD9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CASKIN1Q8WXD9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CASKIN1Q8WXD9 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC29.54■■■□□ 2.32
CASKIN1Q8WXD9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CASKIN1Q8WXD9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC29.54■■■□□ 2.32
CASKIN1Q8WXD9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CASKIN1Q8WXD9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
CASKIN1Q8WXD9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CASKIN1Q8WXD9 IRX1P1-201ENST00000438849 1838 ntBASIC29.54■■■□□ 2.32
CASKIN1Q8WXD9 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CASKIN1Q8WXD9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CASKIN1Q8WXD9 IPPK-202ENST00000375522 882 ntTSL 3 BASIC29.54■■■□□ 2.32
CASKIN1Q8WXD9 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CASKIN1Q8WXD9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC29.54■■■□□ 2.32
CASKIN1Q8WXD9 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC29.54■■■□□ 2.32
CASKIN1Q8WXD9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC29.54■■■□□ 2.32
CASKIN1Q8WXD9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC29.53■■■□□ 2.32
CASKIN1Q8WXD9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC29.53■■■□□ 2.32
CASKIN1Q8WXD9 AC008556.1-201ENST00000610908 2040 ntBASIC29.53■■■□□ 2.32
CASKIN1Q8WXD9 KRT8P32-201ENST00000512863 1461 ntBASIC29.53■■■□□ 2.32
CASKIN1Q8WXD9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CASKIN1Q8WXD9 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CASKIN1Q8WXD9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
CASKIN1Q8WXD9 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC29.53■■■□□ 2.32
CASKIN1Q8WXD9 ELP6-205ENST00000439305 880 ntTSL 2 BASIC29.53■■■□□ 2.32
CASKIN1Q8WXD9 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC29.53■■■□□ 2.32
CASKIN1Q8WXD9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC29.53■■■□□ 2.32
CASKIN1Q8WXD9 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CASKIN1Q8WXD9 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CASKIN1Q8WXD9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CASKIN1Q8WXD9 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC29.52■■■□□ 2.32
CASKIN1Q8WXD9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CASKIN1Q8WXD9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC29.52■■■□□ 2.32
CASKIN1Q8WXD9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
CASKIN1Q8WXD9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CASKIN1Q8WXD9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CASKIN1Q8WXD9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
CASKIN1Q8WXD9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC29.52■■■□□ 2.32
CASKIN1Q8WXD9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC29.52■■■□□ 2.32
CASKIN1Q8WXD9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CASKIN1Q8WXD9 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CASKIN1Q8WXD9 GRAMD4P1-201ENST00000435181 1110 ntBASIC29.52■■■□□ 2.32
CASKIN1Q8WXD9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC29.52■■■□□ 2.32
CASKIN1Q8WXD9 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC29.52■■■□□ 2.32
CASKIN1Q8WXD9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC29.52■■■□□ 2.32
CASKIN1Q8WXD9 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC29.52■■■□□ 2.32
CASKIN1Q8WXD9 MIR3180-1-201ENST00000580374 94 ntBASIC29.52■■■□□ 2.32
CASKIN1Q8WXD9 MIR3180-3-201ENST00000584616 94 ntBASIC29.52■■■□□ 2.32
CASKIN1Q8WXD9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CASKIN1Q8WXD9 AL136038.4-201ENST00000603606 1261 ntBASIC29.52■■■□□ 2.32
CASKIN1Q8WXD9 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
CASKIN1Q8WXD9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CASKIN1Q8WXD9 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC29.52■■■□□ 2.32
CASKIN1Q8WXD9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CASKIN1Q8WXD9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CASKIN1Q8WXD9 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
CASKIN1Q8WXD9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.32
CASKIN1Q8WXD9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
CASKIN1Q8WXD9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC29.51■■■□□ 2.31
CASKIN1Q8WXD9 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
CASKIN1Q8WXD9 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
CASKIN1Q8WXD9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC29.51■■■□□ 2.31
CASKIN1Q8WXD9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CASKIN1Q8WXD9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC29.51■■■□□ 2.31
CASKIN1Q8WXD9 AL162741.1-201ENST00000565563 1558 ntBASIC29.51■■■□□ 2.31
CASKIN1Q8WXD9 AC012313.10-201ENST00000623509 926 ntBASIC29.51■■■□□ 2.31
CASKIN1Q8WXD9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CASKIN1Q8WXD9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CASKIN1Q8WXD9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC29.51■■■□□ 2.31
CASKIN1Q8WXD9 UBQLN4P1-201ENST00000461599 1801 ntBASIC29.5■■■□□ 2.31
CASKIN1Q8WXD9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC29.5■■■□□ 2.31
CASKIN1Q8WXD9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CASKIN1Q8WXD9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CASKIN1Q8WXD9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CASKIN1Q8WXD9 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC29.5■■■□□ 2.31
CASKIN1Q8WXD9 AL450487.1-201ENST00000426799 995 ntBASIC29.5■■■□□ 2.31
CASKIN1Q8WXD9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC29.5■■■□□ 2.31
CASKIN1Q8WXD9 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
CASKIN1Q8WXD9 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CASKIN1Q8WXD9 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CASKIN1Q8WXD9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC29.5■■■□□ 2.31
CASKIN1Q8WXD9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CASKIN1Q8WXD9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CASKIN1Q8WXD9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC29.5■■■□□ 2.31
CASKIN1Q8WXD9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms