Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.67■□□□□ 0.74
NPAS3Q8IXF0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPAS3Q8IXF0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPAS3Q8IXF0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NPAS3Q8IXF0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NPAS3Q8IXF0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPAS3Q8IXF0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPAS3Q8IXF0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.67■□□□□ 0.74
NPAS3Q8IXF0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPAS3Q8IXF0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
NPAS3Q8IXF0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS3Q8IXF0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS3Q8IXF0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS3Q8IXF0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.66■□□□□ 0.74
NPAS3Q8IXF0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS3Q8IXF0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS3Q8IXF0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.66■□□□□ 0.74
NPAS3Q8IXF0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.66■□□□□ 0.74
NPAS3Q8IXF0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS3Q8IXF0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.66■□□□□ 0.74
NPAS3Q8IXF0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NPAS3Q8IXF0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS3Q8IXF0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.66■□□□□ 0.74
NPAS3Q8IXF0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.66■□□□□ 0.74
NPAS3Q8IXF0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS3Q8IXF0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
NPAS3Q8IXF0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS3Q8IXF0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 AC011498.5-201ENST00000592027 486 ntBASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS3Q8IXF0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.64■□□□□ 0.74
NPAS3Q8IXF0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NPAS3Q8IXF0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.64■□□□□ 0.74
NPAS3Q8IXF0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
NPAS3Q8IXF0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.64■□□□□ 0.74
NPAS3Q8IXF0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NPAS3Q8IXF0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 MCCD1P1-208ENST00000445732 328 ntBASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 TSSC2-201ENST00000450217 709 ntBASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 MIR3180-5-201ENST00000583743 153 ntBASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 AC092329.2-201ENST00000598402 547 ntBASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NPAS3Q8IXF0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPAS3Q8IXF0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NPAS3Q8IXF0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NPAS3Q8IXF0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
NPAS3Q8IXF0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
NPAS3Q8IXF0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
NPAS3Q8IXF0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NPAS3Q8IXF0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.63■□□□□ 0.73
NPAS3Q8IXF0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms