Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTC1Q2NKJ3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTC1Q2NKJ3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 SPDYE15P-201ENST00000424157 909 ntBASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 KRT8P41-201ENST00000533985 1514 ntBASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CTC1Q2NKJ3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CTC1Q2NKJ3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTC1Q2NKJ3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CTC1Q2NKJ3 AC098818.2-201ENST00000564925 2320 ntBASIC20.31■□□□□ 0.84
CTC1Q2NKJ3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CTC1Q2NKJ3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CTC1Q2NKJ3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTC1Q2NKJ3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
CTC1Q2NKJ3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTC1Q2NKJ3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.31■□□□□ 0.84
CTC1Q2NKJ3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CTC1Q2NKJ3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CTC1Q2NKJ3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CTC1Q2NKJ3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTC1Q2NKJ3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTC1Q2NKJ3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CTC1Q2NKJ3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTC1Q2NKJ3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.31■□□□□ 0.84
CTC1Q2NKJ3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CTC1Q2NKJ3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.31■□□□□ 0.84
CTC1Q2NKJ3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTC1Q2NKJ3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.31■□□□□ 0.84
CTC1Q2NKJ3 BX323043.1-201ENST00000641006 1765 ntBASIC20.31■□□□□ 0.84
CTC1Q2NKJ3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
CTC1Q2NKJ3 FP700111.2-201ENST00000619190 1892 ntBASIC20.3■□□□□ 0.84
CTC1Q2NKJ3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CTC1Q2NKJ3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTC1Q2NKJ3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.3■□□□□ 0.84
CTC1Q2NKJ3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTC1Q2NKJ3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.3■□□□□ 0.84
CTC1Q2NKJ3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTC1Q2NKJ3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTC1Q2NKJ3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.3■□□□□ 0.84
CTC1Q2NKJ3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTC1Q2NKJ3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTC1Q2NKJ3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.3■□□□□ 0.84
CTC1Q2NKJ3 AL845331.1-201ENST00000424978 1190 ntBASIC20.3■□□□□ 0.84
CTC1Q2NKJ3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.3■□□□□ 0.84
CTC1Q2NKJ3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CTC1Q2NKJ3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.3■□□□□ 0.84
CTC1Q2NKJ3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.3■□□□□ 0.84
CTC1Q2NKJ3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.3■□□□□ 0.84
CTC1Q2NKJ3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.3■□□□□ 0.84
CTC1Q2NKJ3 PRELID1P1-202ENST00000567272 903 ntBASIC20.3■□□□□ 0.84
CTC1Q2NKJ3 AC092329.2-201ENST00000598402 547 ntBASIC20.3■□□□□ 0.84
CTC1Q2NKJ3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTC1Q2NKJ3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
CTC1Q2NKJ3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CTC1Q2NKJ3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTC1Q2NKJ3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 KRT8P10-201ENST00000450021 1447 ntBASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 AC004870.1-201ENST00000315132 882 ntBASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 FAAHP1-202ENST00000446499 1238 ntBASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CTC1Q2NKJ3 AC111152.3-201ENST00000569699 673 ntBASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms