Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
RAE1P78406 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.04■□□□□ 0.48
RAE1P78406 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.04■□□□□ 0.48
RAE1P78406 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.04■□□□□ 0.48
RAE1P78406 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAE1P78406 AC004951.3-201ENST00000418645 1148 ntBASIC18.04■□□□□ 0.48
RAE1P78406 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RAE1P78406 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.04■□□□□ 0.48
RAE1P78406 AC098590.1-201ENST00000468126 897 ntBASIC18.04■□□□□ 0.48
RAE1P78406 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAE1P78406 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.04■□□□□ 0.48
RAE1P78406 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.04■□□□□ 0.48
RAE1P78406 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.04■□□□□ 0.48
RAE1P78406 AC073195.1-201ENST00000607241 877 ntBASIC18.04■□□□□ 0.48
RAE1P78406 FAM197Y4-202ENST00000622692 608 ntBASIC18.04■□□□□ 0.48
RAE1P78406 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
RAE1P78406 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAE1P78406 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAE1P78406 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAE1P78406 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAE1P78406 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.04■□□□□ 0.48
RAE1P78406 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAE1P78406 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
RAE1P78406 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.03■□□□□ 0.48
RAE1P78406 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAE1P78406 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RAE1P78406 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAE1P78406 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.03■□□□□ 0.48
RAE1P78406 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAE1P78406 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAE1P78406 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAE1P78406 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.03■□□□□ 0.48
RAE1P78406 AC011506.1-201ENST00000474329 610 ntBASIC18.03■□□□□ 0.48
RAE1P78406 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.03■□□□□ 0.48
RAE1P78406 PRSS44-201ENST00000515154 1146 ntBASIC18.03■□□□□ 0.48
RAE1P78406 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAE1P78406 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.03■□□□□ 0.48
RAE1P78406 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.03■□□□□ 0.48
RAE1P78406 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.03■□□□□ 0.48
RAE1P78406 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.03■□□□□ 0.48
RAE1P78406 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.03■□□□□ 0.48
RAE1P78406 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.03■□□□□ 0.48
RAE1P78406 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.03■□□□□ 0.48
RAE1P78406 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.03■□□□□ 0.48
RAE1P78406 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAE1P78406 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAE1P78406 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.03■□□□□ 0.48
RAE1P78406 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAE1P78406 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAE1P78406 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAE1P78406 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.03■□□□□ 0.48
RAE1P78406 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAE1P78406 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.02■□□□□ 0.48
RAE1P78406 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAE1P78406 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAE1P78406 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RAE1P78406 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAE1P78406 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
RAE1P78406 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.02■□□□□ 0.48
RAE1P78406 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
RAE1P78406 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAE1P78406 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.02■□□□□ 0.48
RAE1P78406 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.02■□□□□ 0.48
RAE1P78406 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAE1P78406 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAE1P78406 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAE1P78406 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAE1P78406 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAE1P78406 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
RAE1P78406 AC026271.3-201ENST00000571884 352 ntBASIC18.02■□□□□ 0.48
RAE1P78406 AL031985.4-201ENST00000642138 673 ntBASIC18.02■□□□□ 0.48
RAE1P78406 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAE1P78406 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RAE1P78406 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
RAE1P78406 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RAE1P78406 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
RAE1P78406 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.02■□□□□ 0.47
RAE1P78406 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RAE1P78406 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RAE1P78406 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RAE1P78406 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RAE1P78406 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
RAE1P78406 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAE1P78406 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAE1P78406 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAE1P78406 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAE1P78406 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RAE1P78406 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
RAE1P78406 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAE1P78406 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.01■□□□□ 0.47
RAE1P78406 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RAE1P78406 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RAE1P78406 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAE1P78406 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAE1P78406 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAE1P78406 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RAE1P78406 MESTP1-201ENST00000404287 994 ntBASIC18.01■□□□□ 0.47
RAE1P78406 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.01■□□□□ 0.47
RAE1P78406 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.01■□□□□ 0.47
RAE1P78406 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms