Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TM4SF4P48230 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.71■■□□□ 1.07
TM4SF4P48230 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
TM4SF4P48230 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC21.71■■□□□ 1.07
TM4SF4P48230 POM121L3P-201ENST00000419331 1163 ntBASIC21.71■■□□□ 1.07
TM4SF4P48230 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.71■■□□□ 1.07
TM4SF4P48230 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC21.71■■□□□ 1.07
TM4SF4P48230 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.71■■□□□ 1.07
TM4SF4P48230 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.71■■□□□ 1.07
TM4SF4P48230 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TM4SF4P48230 RPL13AP23-201ENST00000480739 586 ntBASIC21.71■■□□□ 1.07
TM4SF4P48230 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC21.71■■□□□ 1.07
TM4SF4P48230 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.71■■□□□ 1.07
TM4SF4P48230 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.71■■□□□ 1.07
TM4SF4P48230 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TM4SF4P48230 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TM4SF4P48230 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
TM4SF4P48230 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TM4SF4P48230 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TM4SF4P48230 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TM4SF4P48230 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TM4SF4P48230 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TM4SF4P48230 AP005212.1-201ENST00000581547 1997 ntBASIC21.7■■□□□ 1.07
TM4SF4P48230 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TM4SF4P48230 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TM4SF4P48230 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
TM4SF4P48230 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
TM4SF4P48230 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TM4SF4P48230 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TM4SF4P48230 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.7■■□□□ 1.06
TM4SF4P48230 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TM4SF4P48230 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TM4SF4P48230 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TM4SF4P48230 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TM4SF4P48230 IGHGP-201ENST00000390555 1178 ntBASIC21.7■■□□□ 1.06
TM4SF4P48230 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC21.7■■□□□ 1.06
TM4SF4P48230 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TM4SF4P48230 VENTXP7-201ENST00000475503 772 ntBASIC21.7■■□□□ 1.06
TM4SF4P48230 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TM4SF4P48230 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.7■■□□□ 1.06
TM4SF4P48230 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TM4SF4P48230 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.7■■□□□ 1.06
TM4SF4P48230 PIN1-206ENST00000587625 878 ntTSL 2 BASIC21.7■■□□□ 1.06
TM4SF4P48230 LINC02084-201ENST00000606069 1096 ntBASIC21.7■■□□□ 1.06
TM4SF4P48230 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TM4SF4P48230 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.7■■□□□ 1.06
TM4SF4P48230 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.7■■□□□ 1.06
TM4SF4P48230 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TM4SF4P48230 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
TM4SF4P48230 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TM4SF4P48230 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.7■■□□□ 1.06
TM4SF4P48230 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.7■■□□□ 1.06
TM4SF4P48230 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TM4SF4P48230 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TM4SF4P48230 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TM4SF4P48230 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TM4SF4P48230 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.69■■□□□ 1.06
TM4SF4P48230 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TM4SF4P48230 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.69■■□□□ 1.06
TM4SF4P48230 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TM4SF4P48230 GGCT-205ENST00000409436 954 ntTSL 3 BASIC21.69■■□□□ 1.06
TM4SF4P48230 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TM4SF4P48230 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TM4SF4P48230 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.69■■□□□ 1.06
TM4SF4P48230 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.69■■□□□ 1.06
TM4SF4P48230 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
TM4SF4P48230 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TM4SF4P48230 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TM4SF4P48230 HOXB1-202ENST00000577092 1414 ntBASIC21.69■■□□□ 1.06
TM4SF4P48230 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.69■■□□□ 1.06
TM4SF4P48230 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TM4SF4P48230 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.69■■□□□ 1.06
TM4SF4P48230 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
TM4SF4P48230 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
TM4SF4P48230 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TM4SF4P48230 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TM4SF4P48230 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TM4SF4P48230 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC21.68■■□□□ 1.06
TM4SF4P48230 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
TM4SF4P48230 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC21.68■■□□□ 1.06
TM4SF4P48230 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC21.68■■□□□ 1.06
TM4SF4P48230 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TM4SF4P48230 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TM4SF4P48230 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TM4SF4P48230 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.68■■□□□ 1.06
TM4SF4P48230 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TM4SF4P48230 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TM4SF4P48230 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TM4SF4P48230 AL691432.2-201ENST00000607222 2038 ntBASIC21.67■■□□□ 1.06
TM4SF4P48230 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TM4SF4P48230 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.67■■□□□ 1.06
TM4SF4P48230 AC079834.2-201ENST00000609776 1949 ntBASIC21.67■■□□□ 1.06
TM4SF4P48230 ZNF815P-204ENST00000434898 1737 ntBASIC21.67■■□□□ 1.06
TM4SF4P48230 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TM4SF4P48230 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TM4SF4P48230 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TM4SF4P48230 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.67■■□□□ 1.06
TM4SF4P48230 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TM4SF4P48230 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.67■■□□□ 1.06
TM4SF4P48230 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms