Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 AC079834.2-201ENST00000609776 1949 ntBASIC23.31■■□□□ 1.32
KCNA3P22001 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
KCNA3P22001 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
KCNA3P22001 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
KCNA3P22001 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
KCNA3P22001 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
KCNA3P22001 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
KCNA3P22001 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
KCNA3P22001 MIR1233-2-201ENST00000408138 82 ntBASIC23.31■■□□□ 1.32
KCNA3P22001 MIR1233-1-201ENST00000408722 82 ntBASIC23.31■■□□□ 1.32
KCNA3P22001 POLD2P1-201ENST00000511220 997 ntBASIC23.31■■□□□ 1.32
KCNA3P22001 AC106730.1-201ENST00000566722 1090 ntBASIC23.31■■□□□ 1.32
KCNA3P22001 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC23.31■■□□□ 1.32
KCNA3P22001 AC064862.7-201ENST00000604520 867 ntBASIC23.31■■□□□ 1.32
KCNA3P22001 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC23.31■■□□□ 1.32
KCNA3P22001 AC148477.8-201ENST00000624298 468 ntBASIC23.31■■□□□ 1.32
KCNA3P22001 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.31■■□□□ 1.32
KCNA3P22001 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
KCNA3P22001 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
KCNA3P22001 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
KCNA3P22001 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
KCNA3P22001 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC23.3■■□□□ 1.32
KCNA3P22001 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
KCNA3P22001 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
KCNA3P22001 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
KCNA3P22001 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
KCNA3P22001 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
KCNA3P22001 RN7SL606P-201ENST00000472779 293 ntBASIC23.3■■□□□ 1.32
KCNA3P22001 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
KCNA3P22001 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC23.3■■□□□ 1.32
KCNA3P22001 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC23.3■■□□□ 1.32
KCNA3P22001 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
KCNA3P22001 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
KCNA3P22001 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC23.3■■□□□ 1.32
KCNA3P22001 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
KCNA3P22001 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
KCNA3P22001 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.29■■□□□ 1.32
KCNA3P22001 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
KCNA3P22001 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
KCNA3P22001 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC23.29■■□□□ 1.32
KCNA3P22001 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
KCNA3P22001 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
KCNA3P22001 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
KCNA3P22001 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
KCNA3P22001 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
KCNA3P22001 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC23.29■■□□□ 1.32
KCNA3P22001 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC23.29■■□□□ 1.32
KCNA3P22001 FAM197Y8-203ENST00000450145 560 ntBASIC23.29■■□□□ 1.32
KCNA3P22001 AP003733.1-201ENST00000491725 852 ntBASIC23.29■■□□□ 1.32
KCNA3P22001 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC23.29■■□□□ 1.32
KCNA3P22001 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
KCNA3P22001 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC23.29■■□□□ 1.32
KCNA3P22001 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC23.29■■□□□ 1.32
KCNA3P22001 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
KCNA3P22001 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
KCNA3P22001 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC23.29■■□□□ 1.32
KCNA3P22001 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KCNA3P22001 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KCNA3P22001 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC23.28■■□□□ 1.32
KCNA3P22001 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KCNA3P22001 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
KCNA3P22001 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KCNA3P22001 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KCNA3P22001 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KCNA3P22001 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
KCNA3P22001 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC23.28■■□□□ 1.32
KCNA3P22001 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
KCNA3P22001 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
KCNA3P22001 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC23.28■■□□□ 1.32
KCNA3P22001 AL031284.1-201ENST00000419297 478 ntBASIC23.28■■□□□ 1.32
KCNA3P22001 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC23.28■■□□□ 1.32
KCNA3P22001 AC091607.1-201ENST00000490318 1060 ntBASIC23.28■■□□□ 1.32
KCNA3P22001 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
KCNA3P22001 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC23.28■■□□□ 1.32
KCNA3P22001 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC23.28■■□□□ 1.32
KCNA3P22001 HOTTIP_1.1-201ENST00000620415 57 ntBASIC23.28■■□□□ 1.32
KCNA3P22001 ABBA01031661.1-201ENST00000634362 1253 ntBASIC23.28■■□□□ 1.32
KCNA3P22001 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
KCNA3P22001 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
KCNA3P22001 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
KCNA3P22001 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
KCNA3P22001 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
KCNA3P22001 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.28■■□□□ 1.32
KCNA3P22001 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
KCNA3P22001 NSUN5P1-202ENST00000421140 1535 ntBASIC23.28■■□□□ 1.32
KCNA3P22001 NSUN5P2-203ENST00000457352 1529 ntBASIC23.28■■□□□ 1.32
KCNA3P22001 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
KCNA3P22001 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
KCNA3P22001 AC243591.1-201ENST00000452967 1364 ntBASIC23.27■■□□□ 1.32
KCNA3P22001 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.27■■□□□ 1.32
KCNA3P22001 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC23.27■■□□□ 1.32
KCNA3P22001 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.27■■□□□ 1.32
KCNA3P22001 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC23.27■■□□□ 1.32
KCNA3P22001 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC23.27■■□□□ 1.32
KCNA3P22001 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
KCNA3P22001 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
KCNA3P22001 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
KCNA3P22001 FABP5-202ENST00000396359 986 ntTSL 5 BASIC23.27■■□□□ 1.32
KCNA3P22001 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
KCNA3P22001 AC009065.1-201ENST00000564055 1225 ntBASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms