Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CYP3A4P08684 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CYP3A4P08684 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CYP3A4P08684 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.38■■□□□ 1.01
CYP3A4P08684 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.38■■□□□ 1.01
CYP3A4P08684 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CYP3A4P08684 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.38■■□□□ 1.01
CYP3A4P08684 BX664615.1-201ENST00000443558 458 ntBASIC21.38■■□□□ 1.01
CYP3A4P08684 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.38■■□□□ 1.01
CYP3A4P08684 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CYP3A4P08684 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.38■■□□□ 1.01
CYP3A4P08684 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CYP3A4P08684 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.38■■□□□ 1.01
CYP3A4P08684 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CYP3A4P08684 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CYP3A4P08684 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CYP3A4P08684 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.37■■□□□ 1.01
CYP3A4P08684 AL109659.2-201ENST00000606809 1674 ntBASIC21.37■■□□□ 1.01
CYP3A4P08684 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.37■■□□□ 1.01
CYP3A4P08684 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
CYP3A4P08684 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CYP3A4P08684 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CYP3A4P08684 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CYP3A4P08684 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CYP3A4P08684 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.37■■□□□ 1.01
CYP3A4P08684 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CYP3A4P08684 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CYP3A4P08684 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
CYP3A4P08684 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.37■■□□□ 1.01
CYP3A4P08684 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.37■■□□□ 1.01
CYP3A4P08684 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.37■■□□□ 1.01
CYP3A4P08684 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.37■■□□□ 1.01
CYP3A4P08684 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.37■■□□□ 1.01
CYP3A4P08684 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CYP3A4P08684 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.37■■□□□ 1.01
CYP3A4P08684 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CYP3A4P08684 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CYP3A4P08684 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CYP3A4P08684 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CYP3A4P08684 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CYP3A4P08684 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.36■■□□□ 1.01
CYP3A4P08684 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CYP3A4P08684 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CYP3A4P08684 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CYP3A4P08684 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.36■■□□□ 1.01
CYP3A4P08684 MCCD1P1-208ENST00000445732 328 ntBASIC21.36■■□□□ 1.01
CYP3A4P08684 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.36■■□□□ 1.01
CYP3A4P08684 AC104076.2-201ENST00000448912 469 ntBASIC21.36■■□□□ 1.01
CYP3A4P08684 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CYP3A4P08684 AC006011.2-201ENST00000621313 1158 ntBASIC21.36■■□□□ 1.01
CYP3A4P08684 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CYP3A4P08684 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CYP3A4P08684 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CYP3A4P08684 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.36■■□□□ 1.01
CYP3A4P08684 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.36■■□□□ 1.01
CYP3A4P08684 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
CYP3A4P08684 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.35■■□□□ 1.01
CYP3A4P08684 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CYP3A4P08684 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.35■■□□□ 1.01
CYP3A4P08684 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CYP3A4P08684 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CYP3A4P08684 RCC2P3-201ENST00000418112 1537 ntBASIC21.35■■□□□ 1.01
CYP3A4P08684 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CYP3A4P08684 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CYP3A4P08684 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CYP3A4P08684 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.35■■□□□ 1.01
CYP3A4P08684 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.35■■□□□ 1.01
CYP3A4P08684 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.35■■□□□ 1.01
CYP3A4P08684 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CYP3A4P08684 AC068587.9-201ENST00000641814 219 ntBASIC21.35■■□□□ 1.01
CYP3A4P08684 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CYP3A4P08684 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CYP3A4P08684 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CYP3A4P08684 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CYP3A4P08684 AL049812.1-201ENST00000432563 2267 ntBASIC21.35■■□□□ 1.01
CYP3A4P08684 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CYP3A4P08684 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CYP3A4P08684 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CYP3A4P08684 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.35■■□□□ 1.01
CYP3A4P08684 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CYP3A4P08684 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CYP3A4P08684 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CYP3A4P08684 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CYP3A4P08684 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CYP3A4P08684 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CYP3A4P08684 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CYP3A4P08684 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CYP3A4P08684 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.34■■□□□ 1.01
CYP3A4P08684 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CYP3A4P08684 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CYP3A4P08684 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.34■■□□□ 1.01
CYP3A4P08684 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CYP3A4P08684 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.34■■□□□ 1.01
CYP3A4P08684 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.34■■□□□ 1.01
CYP3A4P08684 MIR3180-5-201ENST00000583743 153 ntBASIC21.34■■□□□ 1.01
CYP3A4P08684 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
CYP3A4P08684 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CYP3A4P08684 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.34■■□□□ 1.01
CYP3A4P08684 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.34■■□□□ 1.01
CYP3A4P08684 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms