Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.91■□□□□ 0.78
APOEP02649 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APOEP02649 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
APOEP02649 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
APOEP02649 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
APOEP02649 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
APOEP02649 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APOEP02649 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
APOEP02649 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APOEP02649 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.9■□□□□ 0.78
APOEP02649 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
APOEP02649 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APOEP02649 CRYGFP-201ENST00000418459 633 ntBASIC19.9■□□□□ 0.78
APOEP02649 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.9■□□□□ 0.78
APOEP02649 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APOEP02649 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.9■□□□□ 0.78
APOEP02649 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.9■□□□□ 0.78
APOEP02649 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.9■□□□□ 0.78
APOEP02649 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.9■□□□□ 0.78
APOEP02649 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
APOEP02649 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.9■□□□□ 0.78
APOEP02649 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
APOEP02649 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APOEP02649 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
APOEP02649 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APOEP02649 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APOEP02649 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.9■□□□□ 0.78
APOEP02649 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
APOEP02649 MMP23A-201ENST00000234610 1017 ntBASIC19.89■□□□□ 0.77
APOEP02649 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
APOEP02649 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
APOEP02649 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
APOEP02649 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
APOEP02649 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
APOEP02649 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
APOEP02649 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
APOEP02649 TSPY21P-201ENST00000433481 731 ntBASIC19.89■□□□□ 0.77
APOEP02649 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.89■□□□□ 0.77
APOEP02649 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
APOEP02649 FITM1-202ENST00000559294 800 ntBASIC19.89■□□□□ 0.77
APOEP02649 AP005242.2-201ENST00000580065 1175 ntBASIC19.89■□□□□ 0.77
APOEP02649 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
APOEP02649 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
APOEP02649 AL032819.2-201ENST00000624543 2162 ntBASIC19.89■□□□□ 0.77
APOEP02649 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.89■□□□□ 0.77
APOEP02649 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.89■□□□□ 0.77
APOEP02649 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
APOEP02649 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
APOEP02649 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
APOEP02649 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.88■□□□□ 0.77
APOEP02649 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.88■□□□□ 0.77
APOEP02649 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
APOEP02649 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.88■□□□□ 0.77
APOEP02649 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
APOEP02649 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
APOEP02649 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
APOEP02649 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
APOEP02649 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
APOEP02649 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
APOEP02649 AL390955.1-201ENST00000428694 934 ntBASIC19.88■□□□□ 0.77
APOEP02649 MFAP1P1-201ENST00000442257 1255 ntBASIC19.88■□□□□ 0.77
APOEP02649 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.88■□□□□ 0.77
APOEP02649 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
APOEP02649 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.88■□□□□ 0.77
APOEP02649 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
APOEP02649 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
APOEP02649 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
APOEP02649 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.88■□□□□ 0.77
APOEP02649 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
APOEP02649 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
APOEP02649 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
APOEP02649 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
APOEP02649 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
APOEP02649 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.87■□□□□ 0.77
APOEP02649 AC096733.2-201ENST00000609937 1394 ntBASIC19.87■□□□□ 0.77
APOEP02649 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.87■□□□□ 0.77
APOEP02649 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.87■□□□□ 0.77
APOEP02649 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.87■□□□□ 0.77
APOEP02649 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
APOEP02649 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.87■□□□□ 0.77
APOEP02649 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
APOEP02649 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
APOEP02649 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
APOEP02649 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
APOEP02649 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
APOEP02649 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.87■□□□□ 0.77
APOEP02649 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.87■□□□□ 0.77
APOEP02649 PRSS44-201ENST00000515154 1146 ntBASIC19.87■□□□□ 0.77
APOEP02649 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
APOEP02649 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
APOEP02649 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.87■□□□□ 0.77
APOEP02649 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
APOEP02649 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.87■□□□□ 0.77
APOEP02649 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
APOEP02649 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
APOEP02649 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
APOEP02649 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
APOEP02649 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
APOEP02649 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.86■□□□□ 0.77
APOEP02649 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms