Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PEX1O43933 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PEX1O43933 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PEX1O43933 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
PEX1O43933 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PEX1O43933 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PEX1O43933 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.5■□□□□ 0.55
PEX1O43933 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PEX1O43933 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
PEX1O43933 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PEX1O43933 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PEX1O43933 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PEX1O43933 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PEX1O43933 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.49■□□□□ 0.55
PEX1O43933 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.49■□□□□ 0.55
PEX1O43933 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.49■□□□□ 0.55
PEX1O43933 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PEX1O43933 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PEX1O43933 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PEX1O43933 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.49■□□□□ 0.55
PEX1O43933 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PEX1O43933 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.49■□□□□ 0.55
PEX1O43933 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PEX1O43933 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.49■□□□□ 0.55
PEX1O43933 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.49■□□□□ 0.55
PEX1O43933 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PEX1O43933 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.49■□□□□ 0.55
PEX1O43933 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.49■□□□□ 0.55
PEX1O43933 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PEX1O43933 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PEX1O43933 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PEX1O43933 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
PEX1O43933 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.49■□□□□ 0.55
PEX1O43933 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PEX1O43933 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PEX1O43933 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.49■□□□□ 0.55
PEX1O43933 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PEX1O43933 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.49■□□□□ 0.55
PEX1O43933 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PEX1O43933 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PEX1O43933 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PEX1O43933 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PEX1O43933 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.48■□□□□ 0.55
PEX1O43933 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PEX1O43933 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PEX1O43933 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PEX1O43933 AC093525.10-201ENST00000625130 1569 ntBASIC18.48■□□□□ 0.55
PEX1O43933 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.48■□□□□ 0.55
PEX1O43933 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PEX1O43933 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PEX1O43933 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.48■□□□□ 0.55
PEX1O43933 AL390719.1-204ENST00000412397 1219 ntBASIC18.48■□□□□ 0.55
PEX1O43933 POM121L13P-201ENST00000422362 380 ntBASIC18.48■□□□□ 0.55
PEX1O43933 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.48■□□□□ 0.55
PEX1O43933 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.48■□□□□ 0.55
PEX1O43933 AC005829.2-201ENST00000571422 1056 ntBASIC18.48■□□□□ 0.55
PEX1O43933 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PEX1O43933 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PEX1O43933 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PEX1O43933 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
PEX1O43933 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PEX1O43933 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PEX1O43933 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PEX1O43933 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PEX1O43933 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PEX1O43933 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.48■□□□□ 0.55
PEX1O43933 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.48■□□□□ 0.55
PEX1O43933 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PEX1O43933 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PEX1O43933 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PEX1O43933 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PEX1O43933 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.47■□□□□ 0.55
PEX1O43933 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.47■□□□□ 0.55
PEX1O43933 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PEX1O43933 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PEX1O43933 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PEX1O43933 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.47■□□□□ 0.55
PEX1O43933 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PEX1O43933 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
PEX1O43933 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PEX1O43933 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.47■□□□□ 0.55
PEX1O43933 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PEX1O43933 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PEX1O43933 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
PEX1O43933 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PEX1O43933 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PEX1O43933 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.47■□□□□ 0.55
PEX1O43933 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
PEX1O43933 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.47■□□□□ 0.55
PEX1O43933 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
PEX1O43933 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.47■□□□□ 0.55
PEX1O43933 AC006557.6-201ENST00000623071 864 ntBASIC18.47■□□□□ 0.55
PEX1O43933 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.47■□□□□ 0.55
PEX1O43933 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PEX1O43933 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PEX1O43933 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PEX1O43933 Z98044.1-201ENST00000632503 1764 ntBASIC18.47■□□□□ 0.55
PEX1O43933 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PEX1O43933 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PEX1O43933 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms