Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 TMPOP1-202ENST00000424642 1267 ntBASIC17.89■□□□□ 0.45
FOXS1O43638 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXS1O43638 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXS1O43638 AL138966.2-201ENST00000621997 464 ntBASIC17.89■□□□□ 0.45
FOXS1O43638 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXS1O43638 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXS1O43638 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXS1O43638 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXS1O43638 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXS1O43638 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
FOXS1O43638 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXS1O43638 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXS1O43638 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXS1O43638 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXS1O43638 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXS1O43638 KRT8P45-201ENST00000414328 1447 ntBASIC17.89■□□□□ 0.45
FOXS1O43638 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXS1O43638 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXS1O43638 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXS1O43638 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXS1O43638 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.88■□□□□ 0.45
FOXS1O43638 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXS1O43638 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
FOXS1O43638 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXS1O43638 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.88■□□□□ 0.45
FOXS1O43638 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.88■□□□□ 0.45
FOXS1O43638 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXS1O43638 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXS1O43638 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXS1O43638 GPAT2P1-201ENST00000444924 1672 ntBASIC17.88■□□□□ 0.45
FOXS1O43638 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXS1O43638 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
FOXS1O43638 LIN28AP1-201ENST00000429574 405 ntBASIC17.88■□□□□ 0.45
FOXS1O43638 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.88■□□□□ 0.45
FOXS1O43638 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.88■□□□□ 0.45
FOXS1O43638 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.88■□□□□ 0.45
FOXS1O43638 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
FOXS1O43638 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
FOXS1O43638 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXS1O43638 AL161938.1-201ENST00000569833 2180 ntBASIC17.88■□□□□ 0.45
FOXS1O43638 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXS1O43638 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXS1O43638 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXS1O43638 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
FOXS1O43638 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXS1O43638 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXS1O43638 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXS1O43638 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
FOXS1O43638 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXS1O43638 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXS1O43638 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXS1O43638 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXS1O43638 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.87■□□□□ 0.45
FOXS1O43638 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXS1O43638 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXS1O43638 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXS1O43638 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.87■□□□□ 0.45
FOXS1O43638 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
FOXS1O43638 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.87■□□□□ 0.45
FOXS1O43638 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXS1O43638 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.87■□□□□ 0.45
FOXS1O43638 ATP5G1P1-201ENST00000448724 379 ntBASIC17.87■□□□□ 0.45
FOXS1O43638 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
FOXS1O43638 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.87■□□□□ 0.45
FOXS1O43638 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
FOXS1O43638 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.87■□□□□ 0.45
FOXS1O43638 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXS1O43638 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.87■□□□□ 0.45
FOXS1O43638 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.87■□□□□ 0.45
FOXS1O43638 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.87■□□□□ 0.45
FOXS1O43638 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXS1O43638 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXS1O43638 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXS1O43638 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXS1O43638 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXS1O43638 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.87■□□□□ 0.45
FOXS1O43638 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXS1O43638 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXS1O43638 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXS1O43638 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.86■□□□□ 0.45
FOXS1O43638 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXS1O43638 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.86■□□□□ 0.45
FOXS1O43638 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXS1O43638 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
FOXS1O43638 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
FOXS1O43638 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXS1O43638 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXS1O43638 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FOXS1O43638 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXS1O43638 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXS1O43638 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXS1O43638 AL023284.2-201ENST00000405850 579 ntBASIC17.86■□□□□ 0.45
FOXS1O43638 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXS1O43638 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.86■□□□□ 0.45
FOXS1O43638 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.86■□□□□ 0.45
FOXS1O43638 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXS1O43638 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXS1O43638 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXS1O43638 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.86■□□□□ 0.45
FOXS1O43638 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms