Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 GPAT2P1-201ENST00000444924 1672 ntBASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TBC1D3BA6NDS4 LINC01521-201ENST00000504184 1943 ntBASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 LINC01311-201ENST00000565162 1445 ntBASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 ZNF444P1-201ENST00000559497 298 ntBASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 AL136038.3-201ENST00000561909 1096 ntBASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 AC116407.4-201ENST00000623319 1061 ntBASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TBC1D3BA6NDS4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.28■□□□□ 0.68
TBC1D3BA6NDS4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TBC1D3BA6NDS4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TBC1D3BA6NDS4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TBC1D3BA6NDS4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TBC1D3BA6NDS4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TBC1D3BA6NDS4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TBC1D3BA6NDS4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TBC1D3BA6NDS4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TBC1D3BA6NDS4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TBC1D3BA6NDS4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TBC1D3BA6NDS4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
TBC1D3BA6NDS4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TBC1D3BA6NDS4 AL023284.2-201ENST00000405850 579 ntBASIC19.27■□□□□ 0.68
TBC1D3BA6NDS4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.27■□□□□ 0.68
TBC1D3BA6NDS4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.27■□□□□ 0.68
TBC1D3BA6NDS4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.27■□□□□ 0.68
TBC1D3BA6NDS4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.27■□□□□ 0.68
TBC1D3BA6NDS4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.27■□□□□ 0.68
TBC1D3BA6NDS4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TBC1D3BA6NDS4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.27■□□□□ 0.68
TBC1D3BA6NDS4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TBC1D3BA6NDS4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TBC1D3BA6NDS4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TBC1D3BA6NDS4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TBC1D3BA6NDS4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.27■□□□□ 0.67
TBC1D3BA6NDS4 Z82202.1-201ENST00000623446 1880 ntBASIC19.26■□□□□ 0.67
TBC1D3BA6NDS4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.26■□□□□ 0.67
TBC1D3BA6NDS4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
TBC1D3BA6NDS4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TBC1D3BA6NDS4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TBC1D3BA6NDS4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TBC1D3BA6NDS4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.26■□□□□ 0.67
TBC1D3BA6NDS4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TBC1D3BA6NDS4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms