Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RNU6-754P-201ENST00000391166 107 ntBASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 AL590084.2-201ENST00000401481 382 ntBASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 FTH1P15-201ENST00000406984 280 ntBASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 MTCO2P12-201ENST00000427426 682 ntBASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 AC099677.2-201ENST00000436385 175 ntBASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 BRK1P2-201ENST00000442875 223 ntBASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 GAPDHP17-201ENST00000449858 1001 ntBASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 snoU13.8-201ENST00000458890 104 ntBASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 ARL2BPP4-201ENST00000506854 471 ntBASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 AC110760.3-202ENST00000515177 371 ntBASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 RNU6-760P-201ENST00000516078 97 ntBASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 AC027309.2-201ENST00000520566 192 ntBASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 AC022861.1-201ENST00000522981 663 ntBASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 AC104417.1-201ENST00000523974 751 ntBASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 AC136618.2-201ENST00000575091 400 ntBASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 Z83818.1-201ENST00000603584 150 ntBASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 AC069114.2-201ENST00000604699 304 ntBASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 AC105148.1-201ENST00000604961 409 ntBASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 KATNBL1P5-201ENST00000605015 517 ntBASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 AC025754.2-201ENST00000606491 432 ntBASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 AC096577.2-201ENST00000611455 153 ntBASIC0.12□□□□□ -2.39
LINC01558Q9Y6Z2 RNU6-188P-201ENST00000364207 107 ntBASIC0.11□□□□□ -2.39
LINC01558Q9Y6Z2 MIR134-201ENST00000385258 73 ntBASIC0.11□□□□□ -2.39
LINC01558Q9Y6Z2 SNORA48.2-201ENST00000390926 124 ntBASIC0.11□□□□□ -2.39
LINC01558Q9Y6Z2 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.11□□□□□ -2.39
LINC01558Q9Y6Z2 CBX3P9-201ENST00000402326 552 ntBASIC0.11□□□□□ -2.39
LINC01558Q9Y6Z2 UBE2Q2P12-201ENST00000414573 204 ntBASIC0.11□□□□□ -2.39
LINC01558Q9Y6Z2 AP1B1P2-201ENST00000416196 106 ntBASIC0.11□□□□□ -2.39
LINC01558Q9Y6Z2 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.11□□□□□ -2.39
LINC01558Q9Y6Z2 RAB28P5-201ENST00000427490 651 ntBASIC0.11□□□□□ -2.39
LINC01558Q9Y6Z2 AC108667.1-201ENST00000428618 249 ntBASIC0.11□□□□□ -2.39
LINC01558Q9Y6Z2 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC0.11□□□□□ -2.39
LINC01558Q9Y6Z2 MTCO1P57-201ENST00000432182 261 ntBASIC0.11□□□□□ -2.39
LINC01558Q9Y6Z2 AL008629.1-201ENST00000438615 184 ntBASIC0.11□□□□□ -2.39
LINC01558Q9Y6Z2 AC108059.3-201ENST00000456388 214 ntBASIC0.11□□□□□ -2.39
LINC01558Q9Y6Z2 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.11□□□□□ -2.39
LINC01558Q9Y6Z2 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC0.11□□□□□ -2.39
LINC01558Q9Y6Z2 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.11□□□□□ -2.39
LINC01558Q9Y6Z2 VN1R83P-201ENST00000595685 445 ntBASIC0.11□□□□□ -2.39
LINC01558Q9Y6Z2 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
LINC01558Q9Y6Z2 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.11□□□□□ -2.39
LINC01558Q9Y6Z2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.11□□□□□ -2.39
LINC01558Q9Y6Z2 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 RNU6-492P-201ENST00000363035 104 ntBASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 RNA5SP259-201ENST00000365541 109 ntBASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 U8.10-201ENST00000384260 133 ntBASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 RNU1-119P-201ENST00000391122 165 ntBASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 CYCSP49-201ENST00000420810 319 ntBASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 TXNL1P1-201ENST00000429528 554 ntBASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 MTATP6P30-201ENST00000443540 664 ntBASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 snoU13.30-201ENST00000458951 104 ntBASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 snoU13.27-201ENST00000459278 104 ntBASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 SNORD79.1-201ENST00000516069 84 ntBASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 RNU6-390P-201ENST00000516259 103 ntBASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 SNORD60.2-201ENST00000516883 86 ntBASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 SUMO2P18-201ENST00000518873 252 ntBASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 AC133794.1-201ENST00000602731 914 ntBASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 AC017083.3-201ENST00000609955 700 ntBASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 AC008759.3-201ENST00000613300 508 ntBASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 AC093913.1-201ENST00000614178 329 ntBASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.1□□□□□ -2.39
LINC01558Q9Y6Z2 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 RNU6-1237P-201ENST00000384777 107 ntBASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 AL357139.1-201ENST00000407792 426 ntBASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 MTCO2P5-201ENST00000422621 426 ntBASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 AL365400.1-201ENST00000431854 640 ntBASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 AC234064.1-201ENST00000436312 247 ntBASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 MTCO3P45-201ENST00000443036 613 ntBASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 RPL39P6-201ENST00000448289 150 ntBASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 MTND1P9-201ENST00000453775 944 ntBASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 RNU6-333P-201ENST00000459117 107 ntBASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 RPS26P45-201ENST00000471748 340 ntBASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 MED28P2-201ENST00000475771 317 ntBASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 TMEM251P1-201ENST00000503717 318 ntBASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms