Protein–RNA interactions for Protein: Q9Y4D8

HECTD4, Probable E3 ubiquitin-protein ligase HECTD4, humanhuman

Predictions only

Length 3,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4Q9Y4D8 Y_RNA.790-201ENST00000614282 102 ntBASIC0.1□□□□□ -2.39
HECTD4Q9Y4D8 Y_RNA.782-201ENST00000614695 102 ntBASIC0.1□□□□□ -2.39
HECTD4Q9Y4D8 AC068057.2-201ENST00000624047 895 ntBASIC0.1□□□□□ -2.39
HECTD4Q9Y4D8 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.09□□□□□ -2.39
HECTD4Q9Y4D8 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.39
HECTD4Q9Y4D8 AC138393.1-203ENST00000327086 343 ntBASIC0.09□□□□□ -2.39
HECTD4Q9Y4D8 MIR411-201ENST00000362239 96 ntBASIC0.09□□□□□ -2.39
HECTD4Q9Y4D8 SNORD114-31-201ENST00000363219 75 ntBASIC0.09□□□□□ -2.39
HECTD4Q9Y4D8 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.09□□□□□ -2.39
HECTD4Q9Y4D8 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.09□□□□□ -2.39
HECTD4Q9Y4D8 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.09□□□□□ -2.39
HECTD4Q9Y4D8 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.09□□□□□ -2.39
HECTD4Q9Y4D8 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.09□□□□□ -2.39
HECTD4Q9Y4D8 RNU6-889P-201ENST00000517189 103 ntBASIC0.09□□□□□ -2.39
HECTD4Q9Y4D8 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.09□□□□□ -2.39
HECTD4Q9Y4D8 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.09□□□□□ -2.39
HECTD4Q9Y4D8 RSL24D1P11-201ENST00000591045 491 ntBASIC0.09□□□□□ -2.39
HECTD4Q9Y4D8 AC100812.1-201ENST00000607622 580 ntBASIC0.09□□□□□ -2.39
HECTD4Q9Y4D8 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.09□□□□□ -2.39
HECTD4Q9Y4D8 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.09□□□□□ -2.39
HECTD4Q9Y4D8 Y_RNA.495-201ENST00000384435 112 ntBASIC0.09□□□□□ -2.4
HECTD4Q9Y4D8 RNA5SP501-201ENST00000410990 112 ntBASIC0.09□□□□□ -2.4
HECTD4Q9Y4D8 DDX3P2-201ENST00000446138 111 ntBASIC0.09□□□□□ -2.4
HECTD4Q9Y4D8 RNU4ATAC10P-201ENST00000516967 122 ntBASIC0.09□□□□□ -2.4
HECTD4Q9Y4D8 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.09□□□□□ -2.4
HECTD4Q9Y4D8 AL136520.1-202ENST00000555494 763 ntBASIC0.09□□□□□ -2.4
HECTD4Q9Y4D8 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.09□□□□□ -2.4
HECTD4Q9Y4D8 AC068790.6-201ENST00000602558 258 ntBASIC0.09□□□□□ -2.4
HECTD4Q9Y4D8 AC021171.1-201ENST00000603137 706 ntBASIC0.09□□□□□ -2.4
HECTD4Q9Y4D8 AL713866.2-201ENST00000603579 219 ntBASIC0.09□□□□□ -2.4
HECTD4Q9Y4D8 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
HECTD4Q9Y4D8 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.09□□□□□ -2.4
HECTD4Q9Y4D8 SNORD114-3-201ENST00000364969 75 ntBASIC0.09□□□□□ -2.4
HECTD4Q9Y4D8 MIR518D-201ENST00000385014 87 ntBASIC0.09□□□□□ -2.4
HECTD4Q9Y4D8 RPL22P18-201ENST00000417197 377 ntBASIC0.09□□□□□ -2.4
HECTD4Q9Y4D8 C1DP1-201ENST00000426049 402 ntBASIC0.09□□□□□ -2.4
HECTD4Q9Y4D8 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.09□□□□□ -2.4
HECTD4Q9Y4D8 AC010631.1-201ENST00000474150 156 ntBASIC0.09□□□□□ -2.4
HECTD4Q9Y4D8 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC0.09□□□□□ -2.4
HECTD4Q9Y4D8 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.09□□□□□ -2.4
HECTD4Q9Y4D8 AC074198.2-201ENST00000508153 258 ntBASIC0.09□□□□□ -2.4
HECTD4Q9Y4D8 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.09□□□□□ -2.4
HECTD4Q9Y4D8 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.09□□□□□ -2.4
HECTD4Q9Y4D8 AC004908.3-201ENST00000610248 625 ntBASIC0.09□□□□□ -2.4
HECTD4Q9Y4D8 SNORD115-3-201ENST00000363100 82 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 SNORA32.3-201ENST00000384772 121 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 RNU1-119P-201ENST00000391122 165 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 RNA5SP56-201ENST00000410277 118 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 RNU2-43P-201ENST00000410306 190 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 BTF3P11-201ENST00000426582 477 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 RPS26P45-201ENST00000471748 340 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 AC022493.2-201ENST00000506122 481 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 EIF1P4-201ENST00000572664 335 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 RNU6-730P-201ENST00000383954 104 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 RNU6-712P-201ENST00000410558 100 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 RNU4-78P-201ENST00000410940 126 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 GTF2IP20-201ENST00000431663 360 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 MTCO2P20-201ENST00000437339 673 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 AL441985.1-201ENST00000457727 251 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 snoU13.9-201ENST00000458927 103 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 AC104629.2-201ENST00000468627 598 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 RPL23AP54-201ENST00000495129 419 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 SCARNA15.2-201ENST00000516409 127 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 IGKV1-22-201ENST00000524313 326 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 HMGN2P15-201ENST00000585707 270 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 AC004775.1-201ENST00000607389 753 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 AC018926.3-201ENST00000618841 406 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 Z75746.1-201ENST00000440243 2080 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 DSTNP4-201ENST00000399472 474 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 RNU2-64P-201ENST00000411315 191 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 USP9YP26-201ENST00000421008 661 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 USP9YP18-201ENST00000425912 695 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 ISCA1P1-201ENST00000426679 387 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 NDUFA5P10-201ENST00000432147 357 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 USP9YP24-201ENST00000434374 697 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 AC069257.2-201ENST00000441819 155 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 USP9YP17-201ENST00000444617 696 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 AC016717.1-201ENST00000448918 286 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 BUD31P2-201ENST00000449374 300 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 AL133373.1-201ENST00000497098 94 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 AC125611.1-201ENST00000549563 229 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 KATNBL1P5-201ENST00000605015 517 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 U4atac.1-201ENST00000618345 95 ntBASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.08□□□□□ -2.4
HECTD4Q9Y4D8 RNU5A-1-201ENST00000362698 116 ntBASIC0.07□□□□□ -2.4
HECTD4Q9Y4D8 RNU6-217P-201ENST00000384164 104 ntBASIC0.07□□□□□ -2.4
HECTD4Q9Y4D8 Y_RNA.447-201ENST00000384184 113 ntBASIC0.07□□□□□ -2.4
HECTD4Q9Y4D8 Y_RNA.568-201ENST00000384742 113 ntBASIC0.07□□□□□ -2.4
HECTD4Q9Y4D8 RNU6-1054P-201ENST00000411293 104 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms