Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.53□□□□□ -1.84
CDC42EP3Q9UKI2 AC008725.1-201ENST00000605123 2263 ntBASIC3.53□□□□□ -1.85
CDC42EP3Q9UKI2 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 MAPK10-373ENST00000641983 6772 ntBASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 RNU6-50P-201ENST00000362356 103 ntBASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 RNU1-14P-201ENST00000362759 152 ntBASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 Y_RNA.60-201ENST00000362831 98 ntBASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 RNU6-898P-201ENST00000365627 104 ntBASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 RNA5SP151-201ENST00000365632 117 ntBASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 SNORD115-46-201ENST00000390982 71 ntBASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 HMGN2P30-201ENST00000423237 256 ntBASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 Z82188.1-201ENST00000436709 154 ntBASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 HLA-N-201ENST00000437516 135 ntBASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 AC243964.1-201ENST00000441814 261 ntBASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 AL031659.1-201ENST00000447075 539 ntBASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 snoU13.30-201ENST00000458951 104 ntBASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 Y_RNA.713-201ENST00000517013 96 ntBASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 RN7SKP289-201ENST00000517244 295 ntBASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 AL360157.1-201ENST00000565962 87 ntBASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 MIR5685-201ENST00000579080 79 ntBASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 AC010928.2-201ENST00000588017 287 ntBASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 AL606490.9-201ENST00000603331 271 ntBASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 AL110115.1-201ENST00000614396 364 ntBASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 SDR42E1P4-201ENST00000620894 481 ntBASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 U6.92-201ENST00000636464 89 ntBASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDC42EP3Q9UKI2 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 RNU1-15P-201ENST00000353977 144 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 RNU6-212P-201ENST00000362642 104 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 Y_RNA.84-201ENST00000363011 104 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 RNU6-527P-201ENST00000363425 104 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 RNU6-17P-201ENST00000384245 107 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 RNU6-18P-201ENST00000384527 107 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 MIR548I3-201ENST00000408378 149 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 MIR548I1-201ENST00000408810 149 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 MIR1183-201ENST00000408856 89 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 RNA5SP129-201ENST00000410276 118 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 RNU6-1203P-201ENST00000410703 110 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 RAB9AP3-201ENST00000412737 573 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 NDUFS5P4-201ENST00000412983 318 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 RPL23AP46-201ENST00000438548 490 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 RPL37P4-201ENST00000448908 268 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 RAB9AP1-201ENST00000449393 573 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 HMGB3P8-201ENST00000449709 577 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 U8.22-201ENST00000459141 133 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 RPL23AP75-201ENST00000491601 451 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 RNU6-570P-201ENST00000517051 105 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 MRPS36P4-201ENST00000534436 298 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 CR383656.8-201ENST00000549046 145 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 SYF2P1-201ENST00000550658 413 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 AC007375.1-201ENST00000554513 578 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 AC090617.3-201ENST00000573670 475 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 RN7SL703P-201ENST00000578485 302 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 AL356157.2-201ENST00000605122 111 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 RPL23AP88-201ENST00000605759 454 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 AL021997.2-201ENST00000615674 271 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 AP001282.2-201ENST00000616149 309 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 AC091903.1-201ENST00000624322 454 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 AC233981.2-201ENST00000611524 1614 ntBASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDC42EP3Q9UKI2 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 AC009541.1-201ENST00000438279 2662 ntBASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms