Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 MIR3138-201ENST00000585238 82 ntBASIC4.97□□□□□ -1.61
LIMD1Q9UGP4 RNU2-4P-201ENST00000606190 192 ntBASIC4.97□□□□□ -1.61
LIMD1Q9UGP4 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.97□□□□□ -1.61
LIMD1Q9UGP4 U2.15-201ENST00000611544 191 ntBASIC4.97□□□□□ -1.61
LIMD1Q9UGP4 U2.16-201ENST00000613119 191 ntBASIC4.97□□□□□ -1.61
LIMD1Q9UGP4 U2.12-201ENST00000613778 191 ntBASIC4.97□□□□□ -1.61
LIMD1Q9UGP4 U2.9-201ENST00000615427 191 ntBASIC4.97□□□□□ -1.61
LIMD1Q9UGP4 U2.11-201ENST00000616345 191 ntBASIC4.97□□□□□ -1.61
LIMD1Q9UGP4 U2.2-201ENST00000616535 191 ntBASIC4.97□□□□□ -1.61
LIMD1Q9UGP4 U2.3-201ENST00000617785 191 ntBASIC4.97□□□□□ -1.61
LIMD1Q9UGP4 U2.19-201ENST00000618602 191 ntBASIC4.97□□□□□ -1.61
LIMD1Q9UGP4 RNU2-1-201ENST00000618664 191 ntBASIC4.97□□□□□ -1.61
LIMD1Q9UGP4 U2.6-201ENST00000619225 191 ntBASIC4.97□□□□□ -1.61
LIMD1Q9UGP4 U2.5-201ENST00000619465 191 ntBASIC4.97□□□□□ -1.61
LIMD1Q9UGP4 U2.10-201ENST00000620268 191 ntBASIC4.97□□□□□ -1.61
LIMD1Q9UGP4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.97□□□□□ -1.61
LIMD1Q9UGP4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.97□□□□□ -1.61
LIMD1Q9UGP4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LIMD1Q9UGP4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.97□□□□□ -1.61
LIMD1Q9UGP4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LIMD1Q9UGP4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.97□□□□□ -1.61
LIMD1Q9UGP4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.97□□□□□ -1.61
LIMD1Q9UGP4 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
LIMD1Q9UGP4 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.97□□□□□ -1.61
LIMD1Q9UGP4 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.96□□□□□ -1.61
LIMD1Q9UGP4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.61
LIMD1Q9UGP4 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.96□□□□□ -1.61
LIMD1Q9UGP4 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.96□□□□□ -1.61
LIMD1Q9UGP4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 Y_RNA.182-201ENST00000363880 111 ntBASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 Y_RNA.215-201ENST00000364204 112 ntBASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 Y_RNA.412-201ENST00000384001 104 ntBASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 AC007738.1-201ENST00000413892 348 ntBASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 AC096649.2-201ENST00000416186 393 ntBASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 RPS20P10-201ENST00000451209 253 ntBASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 AL691482.1-201ENST00000453255 87 ntBASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 RPS29P20-201ENST00000489592 171 ntBASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 RNU6-928P-201ENST00000516876 104 ntBASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 AP001781.1-201ENST00000530977 207 ntBASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 AC106785.1-201ENST00000565935 262 ntBASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 AC006272.2-201ENST00000594725 163 ntBASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 AL121932.1-201ENST00000605542 214 ntBASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 AL078604.3-201ENST00000615580 211 ntBASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 AC010266.2-201ENST00000564741 3255 ntBASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LIMD1Q9UGP4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LIMD1Q9UGP4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
LIMD1Q9UGP4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LIMD1Q9UGP4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LIMD1Q9UGP4 RNU6-131P-201ENST00000391144 107 ntBASIC4.95□□□□□ -1.62
LIMD1Q9UGP4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.95□□□□□ -1.62
LIMD1Q9UGP4 RN7SKP16-201ENST00000410180 299 ntBASIC4.95□□□□□ -1.62
LIMD1Q9UGP4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.95□□□□□ -1.62
LIMD1Q9UGP4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.95□□□□□ -1.62
LIMD1Q9UGP4 TGIF1P1-201ENST00000558095 802 ntBASIC4.95□□□□□ -1.62
LIMD1Q9UGP4 AC027176.1-201ENST00000560204 514 ntBASIC4.95□□□□□ -1.62
LIMD1Q9UGP4 IPO5P1-202ENST00000600039 287 ntBASIC4.95□□□□□ -1.62
LIMD1Q9UGP4 ARF4P1-201ENST00000605447 541 ntBASIC4.95□□□□□ -1.62
LIMD1Q9UGP4 MIR92B-201ENST00000607575 96 ntBASIC4.95□□□□□ -1.62
LIMD1Q9UGP4 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LIMD1Q9UGP4 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LIMD1Q9UGP4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LIMD1Q9UGP4 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LIMD1Q9UGP4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LIMD1Q9UGP4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LIMD1Q9UGP4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LIMD1Q9UGP4 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LIMD1Q9UGP4 AC010300.1-201ENST00000600671 5134 ntBASIC4.95□□□□□ -1.62
LIMD1Q9UGP4 AP000542.2-201ENST00000623199 6179 ntBASIC4.95□□□□□ -1.62
LIMD1Q9UGP4 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.95□□□□□ -1.62
LIMD1Q9UGP4 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LIMD1Q9UGP4 AL672167.1-204ENST00000641875 3017 ntBASIC4.94□□□□□ -1.62
LIMD1Q9UGP4 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.94□□□□□ -1.62
LIMD1Q9UGP4 AL672296.1-201ENST00000427780 2158 ntBASIC4.94□□□□□ -1.62
LIMD1Q9UGP4 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LIMD1Q9UGP4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LIMD1Q9UGP4 RNU6-1290P-201ENST00000362957 109 ntBASIC4.94□□□□□ -1.62
LIMD1Q9UGP4 RNA5SP28-201ENST00000363841 119 ntBASIC4.94□□□□□ -1.62
LIMD1Q9UGP4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.94□□□□□ -1.62
LIMD1Q9UGP4 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.94□□□□□ -1.62
LIMD1Q9UGP4 RPL7AP25-201ENST00000423357 805 ntBASIC4.94□□□□□ -1.62
LIMD1Q9UGP4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.94□□□□□ -1.62
LIMD1Q9UGP4 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.94□□□□□ -1.62
LIMD1Q9UGP4 AC107626.1-201ENST00000471084 183 ntBASIC4.94□□□□□ -1.62
LIMD1Q9UGP4 MIR5699-201ENST00000578903 90 ntBASIC4.94□□□□□ -1.62
LIMD1Q9UGP4 RNU6-91P-201ENST00000607774 107 ntBASIC4.94□□□□□ -1.62
LIMD1Q9UGP4 ZYXP1-201ENST00000617638 118 ntBASIC4.94□□□□□ -1.62
LIMD1Q9UGP4 BX005214.3-202ENST00000619809 325 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms