Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 RNU6-774P-201ENST00000363238 107 ntBASIC4.48□□□□□ -1.69
CNTN3Q9P232 MIR518D-201ENST00000385014 87 ntBASIC4.48□□□□□ -1.69
CNTN3Q9P232 RNA5SP213-201ENST00000391031 106 ntBASIC4.48□□□□□ -1.69
CNTN3Q9P232 RNU6-1197P-201ENST00000391183 107 ntBASIC4.48□□□□□ -1.69
CNTN3Q9P232 SNORA57.1-201ENST00000391227 145 ntBASIC4.48□□□□□ -1.69
CNTN3Q9P232 MTCO1P5-201ENST00000433573 344 ntBASIC4.48□□□□□ -1.69
CNTN3Q9P232 AC243964.1-201ENST00000441814 261 ntBASIC4.48□□□□□ -1.69
CNTN3Q9P232 AC006011.1-201ENST00000442758 349 ntBASIC4.48□□□□□ -1.69
CNTN3Q9P232 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.48□□□□□ -1.69
CNTN3Q9P232 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.48□□□□□ -1.69
CNTN3Q9P232 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.48□□□□□ -1.69
CNTN3Q9P232 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.48□□□□□ -1.69
CNTN3Q9P232 AC087477.1-201ENST00000465747 340 ntBASIC4.48□□□□□ -1.69
CNTN3Q9P232 RPL7P49-201ENST00000471402 708 ntBASIC4.48□□□□□ -1.69
CNTN3Q9P232 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CNTN3Q9P232 RNU1-103P-201ENST00000516502 125 ntBASIC4.48□□□□□ -1.69
CNTN3Q9P232 Y_RNA.703-201ENST00000516846 111 ntBASIC4.48□□□□□ -1.69
CNTN3Q9P232 FTX_3.1-201ENST00000610451 147 ntBASIC4.48□□□□□ -1.69
CNTN3Q9P232 AC004825.2-201ENST00000616634 455 ntBASIC4.48□□□□□ -1.69
CNTN3Q9P232 AC022336.2-201ENST00000568966 2538 ntBASIC4.48□□□□□ -1.69
CNTN3Q9P232 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CNTN3Q9P232 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CNTN3Q9P232 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
CNTN3Q9P232 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.47□□□□□ -1.69
CNTN3Q9P232 AC090740.1-201ENST00000623193 2262 ntBASIC4.47□□□□□ -1.69
CNTN3Q9P232 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CNTN3Q9P232 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CNTN3Q9P232 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CNTN3Q9P232 FTLP6-201ENST00000355274 422 ntBASIC4.47□□□□□ -1.69
CNTN3Q9P232 Y_RNA.76-201ENST00000362931 109 ntBASIC4.47□□□□□ -1.69
CNTN3Q9P232 RNU6-942P-201ENST00000363002 107 ntBASIC4.47□□□□□ -1.69
CNTN3Q9P232 Z98749.2-208ENST00000381646 500 ntBASIC4.47□□□□□ -1.69
CNTN3Q9P232 RNU6-926P-201ENST00000384075 107 ntBASIC4.47□□□□□ -1.69
CNTN3Q9P232 RNU6-541P-201ENST00000384709 110 ntBASIC4.47□□□□□ -1.69
CNTN3Q9P232 UBA52P6-201ENST00000399822 382 ntBASIC4.47□□□□□ -1.69
CNTN3Q9P232 RPL26P27-201ENST00000414397 437 ntBASIC4.47□□□□□ -1.69
CNTN3Q9P232 AL390729.2-201ENST00000416137 156 ntBASIC4.47□□□□□ -1.69
CNTN3Q9P232 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.47□□□□□ -1.69
CNTN3Q9P232 AL031659.1-201ENST00000447075 539 ntBASIC4.47□□□□□ -1.69
CNTN3Q9P232 AL451050.1-201ENST00000450126 415 ntBASIC4.47□□□□□ -1.69
CNTN3Q9P232 AP000870.1-201ENST00000472927 406 ntBASIC4.47□□□□□ -1.69
CNTN3Q9P232 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.47□□□□□ -1.69
CNTN3Q9P232 RNA5SP154-201ENST00000516193 111 ntBASIC4.47□□□□□ -1.69
CNTN3Q9P232 RNU6-1198P-201ENST00000516904 67 ntBASIC4.47□□□□□ -1.69
CNTN3Q9P232 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.47□□□□□ -1.69
CNTN3Q9P232 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.47□□□□□ -1.69
CNTN3Q9P232 CYP4A43P-201ENST00000568156 121 ntBASIC4.47□□□□□ -1.69
CNTN3Q9P232 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.47□□□□□ -1.69
CNTN3Q9P232 VN1R85P-201ENST00000601587 426 ntBASIC4.47□□□□□ -1.69
CNTN3Q9P232 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.47□□□□□ -1.69
CNTN3Q9P232 U2.21-201ENST00000637295 81 ntBASIC4.47□□□□□ -1.69
CNTN3Q9P232 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.47□□□□□ -1.69
CNTN3Q9P232 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.47□□□□□ -1.69
CNTN3Q9P232 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CNTN3Q9P232 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CNTN3Q9P232 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.47□□□□□ -1.69
CNTN3Q9P232 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
CNTN3Q9P232 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.47□□□□□ -1.69
CNTN3Q9P232 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CNTN3Q9P232 NEAT1-202ENST00000501122 22743 ntBASIC4.46□□□□□ -1.69
CNTN3Q9P232 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.69
CNTN3Q9P232 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.46□□□□□ -1.69
CNTN3Q9P232 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
CNTN3Q9P232 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
CNTN3Q9P232 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.46□□□□□ -1.69
CNTN3Q9P232 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.46□□□□□ -1.7
CNTN3Q9P232 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.46□□□□□ -1.7
CNTN3Q9P232 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CNTN3Q9P232 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CNTN3Q9P232 RNU6-217P-201ENST00000384164 104 ntBASIC4.46□□□□□ -1.7
CNTN3Q9P232 RNU6-658P-201ENST00000384606 106 ntBASIC4.46□□□□□ -1.7
CNTN3Q9P232 SNORD12B-201ENST00000410433 91 ntBASIC4.46□□□□□ -1.7
CNTN3Q9P232 AL117339.2-201ENST00000430475 180 ntBASIC4.46□□□□□ -1.7
CNTN3Q9P232 AC096638.1-201ENST00000444678 216 ntBASIC4.46□□□□□ -1.7
CNTN3Q9P232 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.46□□□□□ -1.7
CNTN3Q9P232 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.46□□□□□ -1.7
CNTN3Q9P232 RPL23AP14-201ENST00000468281 468 ntBASIC4.46□□□□□ -1.7
CNTN3Q9P232 VWA8P1-201ENST00000510889 176 ntBASIC4.46□□□□□ -1.7
CNTN3Q9P232 AC107393.1-201ENST00000512403 346 ntBASIC4.46□□□□□ -1.7
CNTN3Q9P232 RN7SKP49-201ENST00000516675 260 ntBASIC4.46□□□□□ -1.7
CNTN3Q9P232 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.46□□□□□ -1.7
CNTN3Q9P232 IFITM8P-201ENST00000522529 394 ntBASIC4.46□□□□□ -1.7
CNTN3Q9P232 AC024405.2-202ENST00000532731 184 ntBASIC4.46□□□□□ -1.7
CNTN3Q9P232 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.46□□□□□ -1.7
CNTN3Q9P232 HSPE1P5-201ENST00000561489 272 ntBASIC4.46□□□□□ -1.7
CNTN3Q9P232 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CNTN3Q9P232 AL162424.1-201ENST00000602325 221 ntBASIC4.46□□□□□ -1.7
CNTN3Q9P232 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
CNTN3Q9P232 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CNTN3Q9P232 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CNTN3Q9P232 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CNTN3Q9P232 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.46□□□□□ -1.7
CNTN3Q9P232 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.46□□□□□ -1.7
CNTN3Q9P232 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CNTN3Q9P232 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
CNTN3Q9P232 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CNTN3Q9P232 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CNTN3Q9P232 AC008725.1-201ENST00000605123 2263 ntBASIC4.46□□□□□ -1.7
CNTN3Q9P232 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CNTN3Q9P232 SRP72P2-201ENST00000344851 1979 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms