Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AP001486.1-201ENST00000463339 476 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 MTCO1P29-201ENST00000496868 288 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 HIGD1AP13-201ENST00000509878 289 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 AP003122.3-201ENST00000526316 255 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 AC084851.1-201ENST00000529105 249 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 AC022080.3-201ENST00000544433 482 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 EIF4BP1-201ENST00000554881 351 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 AL157871.3-201ENST00000557231 293 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 MTND4LP5-201ENST00000605152 292 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 uc_338.15-201ENST00000615470 191 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 MTND5P19-201ENST00000424872 1794 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
NCKIPSDQ9NZQ3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 Y_RNA.33-201ENST00000362591 102 ntBASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 SNORA75B-201ENST00000384053 137 ntBASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 Y_RNA.500-201ENST00000384466 111 ntBASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 RPS4XP7-201ENST00000406274 780 ntBASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 MIR548K-201ENST00000408406 116 ntBASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 MIR548F5-201ENST00000408421 86 ntBASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 RNU6-1025P-201ENST00000410629 104 ntBASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 AL353729.1-201ENST00000425044 720 ntBASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 RN7SL75P-201ENST00000461926 281 ntBASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 AC139453.3-201ENST00000493276 369 ntBASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 TRBVA-201ENST00000498804 316 ntBASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 Y_RNA.682-201ENST00000516457 100 ntBASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 RNU6-256P-201ENST00000516747 97 ntBASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 MIR1273C-201ENST00000578669 77 ntBASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 MIR5692C1-201ENST00000585309 91 ntBASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 AC012119.1-201ENST00000603184 222 ntBASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 uc_338.25-201ENST00000613756 156 ntBASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 AC022418.1-201ENST00000624118 445 ntBASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NCKIPSDQ9NZQ3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 Y_RNA.135-201ENST00000363439 95 ntBASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 RNU6-395P-201ENST00000365662 106 ntBASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 RNU6-1013P-201ENST00000384180 107 ntBASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 RNU6-45P-201ENST00000384471 107 ntBASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 RPL37P4-201ENST00000448908 268 ntBASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 SNORA14.1-201ENST00000516113 141 ntBASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 RNU6-1069P-201ENST00000516612 133 ntBASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 COPS8P3-201ENST00000526024 482 ntBASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 AP005597.4-201ENST00000526762 229 ntBASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 MIR2682-201ENST00000580305 110 ntBASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 MIR548AC-201ENST00000585049 88 ntBASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 AL355598.1-201ENST00000604169 202 ntBASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 AL162730.1-201ENST00000605734 292 ntBASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 AL133215.3-201ENST00000609801 448 ntBASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 U2.17-201ENST00000611454 95 ntBASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 AL359757.2-201ENST00000624309 274 ntBASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 U6.99-201ENST00000637524 83 ntBASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 FAM35CP-201ENST00000554755 2470 ntBASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NCKIPSDQ9NZQ3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 Y_RNA.212-201ENST00000364177 102 ntBASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 SNORA14A-201ENST00000364773 135 ntBASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 SNORA51.4-201ENST00000364993 124 ntBASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 RNU6-434P-201ENST00000384376 107 ntBASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 RNU6-658P-201ENST00000384606 106 ntBASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 VN1R36P-201ENST00000414936 291 ntBASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 AC236972.1-201ENST00000433225 199 ntBASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 RPS12P18-201ENST00000442381 270 ntBASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms