Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ATG3Q9NT62 AC005183.1-201ENST00000603687 1979 ntBASIC4.68□□□□□ -1.66
ATG3Q9NT62 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
ATG3Q9NT62 RNU4-35P-201ENST00000362588 141 ntBASIC4.68□□□□□ -1.66
ATG3Q9NT62 RNU1-76P-201ENST00000362903 159 ntBASIC4.68□□□□□ -1.66
ATG3Q9NT62 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.68□□□□□ -1.66
ATG3Q9NT62 Y_RNA.480-201ENST00000384364 102 ntBASIC4.68□□□□□ -1.66
ATG3Q9NT62 MIR128-1-201ENST00000384921 82 ntBASIC4.68□□□□□ -1.66
ATG3Q9NT62 MIR634-201ENST00000385208 97 ntBASIC4.68□□□□□ -1.66
ATG3Q9NT62 Y_RNA.592-201ENST00000410274 109 ntBASIC4.68□□□□□ -1.66
ATG3Q9NT62 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.68□□□□□ -1.66
ATG3Q9NT62 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.68□□□□□ -1.66
ATG3Q9NT62 AC008264.1-201ENST00000447612 367 ntBASIC4.68□□□□□ -1.66
ATG3Q9NT62 RN7SL807P-201ENST00000470923 297 ntBASIC4.68□□□□□ -1.66
ATG3Q9NT62 AC078918.1-201ENST00000498515 228 ntBASIC4.68□□□□□ -1.66
ATG3Q9NT62 RNU2-27P-201ENST00000516185 142 ntBASIC4.68□□□□□ -1.66
ATG3Q9NT62 RNU6-911P-201ENST00000516523 104 ntBASIC4.68□□□□□ -1.66
ATG3Q9NT62 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.68□□□□□ -1.66
ATG3Q9NT62 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.68□□□□□ -1.66
ATG3Q9NT62 AP004371.1-201ENST00000525240 214 ntBASIC4.68□□□□□ -1.66
ATG3Q9NT62 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.68□□□□□ -1.66
ATG3Q9NT62 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.68□□□□□ -1.66
ATG3Q9NT62 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
ATG3Q9NT62 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
ATG3Q9NT62 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ATG3Q9NT62 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
ATG3Q9NT62 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ATG3Q9NT62 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
ATG3Q9NT62 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.67□□□□□ -1.66
ATG3Q9NT62 RNU6-288P-201ENST00000363690 104 ntBASIC4.67□□□□□ -1.66
ATG3Q9NT62 MIR628-201ENST00000385229 95 ntBASIC4.67□□□□□ -1.66
ATG3Q9NT62 SNORA69.1-201ENST00000390904 137 ntBASIC4.67□□□□□ -1.66
ATG3Q9NT62 SNORD17-201ENST00000390930 237 ntBASIC4.67□□□□□ -1.66
ATG3Q9NT62 HLFP1-201ENST00000402375 499 ntBASIC4.67□□□□□ -1.66
ATG3Q9NT62 RNU6-712P-201ENST00000410558 100 ntBASIC4.67□□□□□ -1.66
ATG3Q9NT62 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.67□□□□□ -1.66
ATG3Q9NT62 EI24P1-201ENST00000416584 867 ntBASIC4.67□□□□□ -1.66
ATG3Q9NT62 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.67□□□□□ -1.66
ATG3Q9NT62 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.67□□□□□ -1.66
ATG3Q9NT62 RPS29P26-201ENST00000477483 171 ntBASIC4.67□□□□□ -1.66
ATG3Q9NT62 AC010469.2-201ENST00000496412 480 ntBASIC4.67□□□□□ -1.66
ATG3Q9NT62 AC067942.3-201ENST00000512025 362 ntBASIC4.67□□□□□ -1.66
ATG3Q9NT62 ACA59.1-201ENST00000515966 143 ntBASIC4.67□□□□□ -1.66
ATG3Q9NT62 SNORA25.14-201ENST00000516481 132 ntBASIC4.67□□□□□ -1.66
ATG3Q9NT62 RNU6-861P-201ENST00000516745 106 ntBASIC4.67□□□□□ -1.66
ATG3Q9NT62 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.67□□□□□ -1.66
ATG3Q9NT62 AP002392.1-201ENST00000537692 208 ntBASIC4.67□□□□□ -1.66
ATG3Q9NT62 AC126177.3-201ENST00000551839 688 ntBASIC4.67□□□□□ -1.66
ATG3Q9NT62 TRAV32-201ENST00000553993 340 ntBASIC4.67□□□□□ -1.66
ATG3Q9NT62 AC174048.1-201ENST00000603389 144 ntBASIC4.67□□□□□ -1.66
ATG3Q9NT62 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.67□□□□□ -1.66
ATG3Q9NT62 AC004832.4-201ENST00000608952 331 ntBASIC4.67□□□□□ -1.66
ATG3Q9NT62 MIR8057-201ENST00000620957 69 ntBASIC4.67□□□□□ -1.66
ATG3Q9NT62 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.67□□□□□ -1.66
ATG3Q9NT62 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
ATG3Q9NT62 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
ATG3Q9NT62 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ATG3Q9NT62 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ATG3Q9NT62 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATG3Q9NT62 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.66□□□□□ -1.66
ATG3Q9NT62 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATG3Q9NT62 Y_RNA.541-201ENST00000384640 113 ntBASIC4.66□□□□□ -1.66
ATG3Q9NT62 MRPL35P1-201ENST00000404272 572 ntBASIC4.66□□□□□ -1.66
ATG3Q9NT62 Z98941.1-201ENST00000407764 100 ntBASIC4.66□□□□□ -1.66
ATG3Q9NT62 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.66□□□□□ -1.66
ATG3Q9NT62 TOMM22P1-201ENST00000418578 312 ntBASIC4.66□□□□□ -1.66
ATG3Q9NT62 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.66□□□□□ -1.66
ATG3Q9NT62 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.66□□□□□ -1.66
ATG3Q9NT62 AL360271.2-201ENST00000447710 161 ntBASIC4.66□□□□□ -1.66
ATG3Q9NT62 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.66□□□□□ -1.66
ATG3Q9NT62 AL359273.1-201ENST00000510918 627 ntBASIC4.66□□□□□ -1.66
ATG3Q9NT62 SCARNA24.2-201ENST00000516968 130 ntBASIC4.66□□□□□ -1.66
ATG3Q9NT62 AC024405.2-202ENST00000532731 184 ntBASIC4.66□□□□□ -1.66
ATG3Q9NT62 CR383656.7-201ENST00000548164 174 ntBASIC4.66□□□□□ -1.66
ATG3Q9NT62 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.66□□□□□ -1.66
ATG3Q9NT62 AC005951.2-201ENST00000576282 495 ntBASIC4.66□□□□□ -1.66
ATG3Q9NT62 CPDP1-201ENST00000579660 283 ntBASIC4.66□□□□□ -1.66
ATG3Q9NT62 MIR4300-201ENST00000581016 96 ntBASIC4.66□□□□□ -1.66
ATG3Q9NT62 MZT1P2-201ENST00000604387 248 ntBASIC4.66□□□□□ -1.66
ATG3Q9NT62 AL031601.2-202ENST00000622650 282 ntBASIC4.66□□□□□ -1.66
ATG3Q9NT62 Z75746.1-201ENST00000440243 2080 ntBASIC4.66□□□□□ -1.66
ATG3Q9NT62 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
ATG3Q9NT62 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.66□□□□□ -1.66
ATG3Q9NT62 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ATG3Q9NT62 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
ATG3Q9NT62 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
ATG3Q9NT62 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
ATG3Q9NT62 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
ATG3Q9NT62 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.65□□□□□ -1.66
ATG3Q9NT62 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
ATG3Q9NT62 MIR411-201ENST00000362239 96 ntBASIC4.65□□□□□ -1.67
ATG3Q9NT62 Y_RNA.76-201ENST00000362931 109 ntBASIC4.65□□□□□ -1.67
ATG3Q9NT62 Y_RNA.199-201ENST00000364014 102 ntBASIC4.65□□□□□ -1.67
ATG3Q9NT62 RNU6-704P-201ENST00000364162 103 ntBASIC4.65□□□□□ -1.67
ATG3Q9NT62 SNORD50B-201ENST00000364995 70 ntBASIC4.65□□□□□ -1.67
ATG3Q9NT62 RNA5SP167-201ENST00000365461 116 ntBASIC4.65□□□□□ -1.67
ATG3Q9NT62 MIR578-201ENST00000384828 96 ntBASIC4.65□□□□□ -1.67
ATG3Q9NT62 CYCSP33-201ENST00000414485 327 ntBASIC4.65□□□□□ -1.67
ATG3Q9NT62 AC087650.1-201ENST00000431445 468 ntBASIC4.65□□□□□ -1.67
ATG3Q9NT62 U3.44-201ENST00000458938 192 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms