Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AL121757.2-201ENST00000611223 313 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 ATP5A1P2-202ENST00000616464 443 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 AL035425.3-201ENST00000564206 4996 ntBASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SLC6A13Q9NSD5 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 MIR22-201ENST00000362190 85 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 RNU6-858P-201ENST00000362436 107 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 SNORD113-7-201ENST00000363762 77 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 SNORA38.1-201ENST00000364172 131 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 SNORA51.4-201ENST00000364993 124 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 AL162578.1-201ENST00000406202 378 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 RNU4-47P-201ENST00000410876 114 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 SNORD56-201ENST00000413522 71 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 AL451074.5-201ENST00000415894 435 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 RPL7P37-201ENST00000425095 738 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 NDUFA5P4-201ENST00000436704 385 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 RNU7-66P-201ENST00000459469 62 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 RPL27AP5-201ENST00000469428 449 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 MED28P2-201ENST00000475771 317 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 RPL23AP45-201ENST00000476406 468 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 RNU5F-8P-201ENST00000515941 111 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 SCARNA11.3-201ENST00000517276 130 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 AC109479.2-201ENST00000517842 174 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 BTF3P12-201ENST00000519620 469 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 AC087854.1-201ENST00000519706 414 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 RNU6-323P-201ENST00000521915 107 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 GLYCAM1-201ENST00000546596 285 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 MIR5680-201ENST00000577577 84 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 AC018638.8-201ENST00000588755 281 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 OR1M4P-201ENST00000589199 287 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 AC010620.2-201ENST00000600135 313 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 BNIP3P10-201ENST00000605360 577 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 CTHRC1P1-201ENST00000605383 469 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 AL357078.3-201ENST00000607528 618 ntBASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.8□□□□□ -1.96
SLC6A13Q9NSD5 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 SNORD21-201ENST00000383953 95 ntBASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 U3.19-201ENST00000390893 196 ntBASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 U3.26-201ENST00000391236 204 ntBASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 FGF7P8-201ENST00000402994 292 ntBASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 AL356776.1-201ENST00000406574 447 ntBASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 AC093151.1-201ENST00000427711 313 ntBASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 TRBVA-201ENST00000498804 316 ntBASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 PRDX4P1-201ENST00000507189 574 ntBASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 AC098799.2-201ENST00000509466 868 ntBASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 SCARNA17.1-201ENST00000516211 143 ntBASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 SCARNA17.2-201ENST00000516334 143 ntBASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 RNU6-1314P-201ENST00000517139 104 ntBASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 COPS8P3-201ENST00000526024 482 ntBASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 PSMA3P-201ENST00000555485 635 ntBASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 AC005000.2-201ENST00000605468 310 ntBASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 uc_338.14-201ENST00000613162 166 ntBASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 SCARNA17.4-201ENST00000614296 143 ntBASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 MIR3529-201ENST00000637713 78 ntBASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 U4.7-201ENST00000638126 106 ntBASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 HAUS6P2-201ENST00000433254 2404 ntBASIC2.79□□□□□ -1.96
SLC6A13Q9NSD5 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.78□□□□□ -1.96
SLC6A13Q9NSD5 CASC19-280ENST00000642102 1351 ntBASIC2.78□□□□□ -1.96
SLC6A13Q9NSD5 Y_RNA.86-201ENST00000363020 111 ntBASIC2.78□□□□□ -1.96
SLC6A13Q9NSD5 RNU6-1083P-201ENST00000384022 107 ntBASIC2.78□□□□□ -1.96
SLC6A13Q9NSD5 SNORD116-20-201ENST00000384529 92 ntBASIC2.78□□□□□ -1.96
SLC6A13Q9NSD5 MIR181A2-201ENST00000384863 110 ntBASIC2.78□□□□□ -1.96
SLC6A13Q9NSD5 AL590004.2-201ENST00000404787 371 ntBASIC2.78□□□□□ -1.96
SLC6A13Q9NSD5 RN7SKP58-201ENST00000411010 305 ntBASIC2.78□□□□□ -1.96
SLC6A13Q9NSD5 AL513185.2-201ENST00000425543 193 ntBASIC2.78□□□□□ -1.96
SLC6A13Q9NSD5 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.78□□□□□ -1.96
SLC6A13Q9NSD5 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.78□□□□□ -1.96
SLC6A13Q9NSD5 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.78□□□□□ -1.96
SLC6A13Q9NSD5 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.78□□□□□ -1.96
SLC6A13Q9NSD5 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.78□□□□□ -1.96
SLC6A13Q9NSD5 RPS29P2-201ENST00000479278 136 ntBASIC2.78□□□□□ -1.96
SLC6A13Q9NSD5 RN7SL504P-201ENST00000494496 287 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms