Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.34□□□□□ -2.03
HPS4Q9NQG7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.34□□□□□ -2.03
HPS4Q9NQG7 AC112206.3-201ENST00000514578 389 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 RANP3-201ENST00000530970 276 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.34□□□□□ -2.03
HPS4Q9NQG7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.34□□□□□ -2.03
HPS4Q9NQG7 AC092325.1-201ENST00000566449 554 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.34□□□□□ -2.03
HPS4Q9NQG7 AC025678.1-201ENST00000567861 338 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 MIR5571-201ENST00000577998 113 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 MIR548AC-201ENST00000585049 88 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 AC040904.1-201ENST00000590850 223 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 AC064872.1-201ENST00000604823 1072 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 AC087045.1-201ENST00000605856 382 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 AC087752.4-201ENST00000605911 462 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 AC009509.4-201ENST00000619202 509 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 AC093648.1-201ENST00000623546 606 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HPS4Q9NQG7 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HPS4Q9NQG7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HPS4Q9NQG7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HPS4Q9NQG7 Y_RNA.201-201ENST00000364052 96 ntBASIC2.33□□□□□ -2.04
HPS4Q9NQG7 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
HPS4Q9NQG7 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HPS4Q9NQG7 SNORA64-201ENST00000384674 134 ntBASIC2.33□□□□□ -2.04
HPS4Q9NQG7 MIR221-201ENST00000385135 110 ntBASIC2.33□□□□□ -2.04
HPS4Q9NQG7 CIR1P3-201ENST00000405137 479 ntBASIC2.33□□□□□ -2.04
HPS4Q9NQG7 SNORD23.1-201ENST00000408212 104 ntBASIC2.33□□□□□ -2.04
HPS4Q9NQG7 RNA5SP111-201ENST00000411386 101 ntBASIC2.33□□□□□ -2.04
HPS4Q9NQG7 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.33□□□□□ -2.04
HPS4Q9NQG7 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.33□□□□□ -2.04
HPS4Q9NQG7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.33□□□□□ -2.04
HPS4Q9NQG7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.33□□□□□ -2.04
HPS4Q9NQG7 KATNBL1P3-201ENST00000443475 909 ntBASIC2.33□□□□□ -2.04
HPS4Q9NQG7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.33□□□□□ -2.04
HPS4Q9NQG7 Y_RNA.638-201ENST00000459374 113 ntBASIC2.33□□□□□ -2.04
HPS4Q9NQG7 AC011005.2-201ENST00000487324 359 ntBASIC2.33□□□□□ -2.04
HPS4Q9NQG7 AC107222.1-201ENST00000510899 637 ntBASIC2.33□□□□□ -2.04
HPS4Q9NQG7 AC079140.3-201ENST00000511111 550 ntBASIC2.33□□□□□ -2.04
HPS4Q9NQG7 MTCO3P28-201ENST00000513351 515 ntBASIC2.33□□□□□ -2.04
HPS4Q9NQG7 RNU6-410P-201ENST00000517006 107 ntBASIC2.33□□□□□ -2.04
HPS4Q9NQG7 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.33□□□□□ -2.04
HPS4Q9NQG7 MIR3913-1-201ENST00000577744 102 ntBASIC2.33□□□□□ -2.04
HPS4Q9NQG7 MIR3611-201ENST00000584484 83 ntBASIC2.33□□□□□ -2.04
HPS4Q9NQG7 AC098848.2-201ENST00000588023 330 ntBASIC2.33□□□□□ -2.04
HPS4Q9NQG7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.33□□□□□ -2.04
HPS4Q9NQG7 SNORD14A-201ENST00000606526 91 ntBASIC2.33□□□□□ -2.04
HPS4Q9NQG7 MIR98-201ENST00000606724 119 ntBASIC2.33□□□□□ -2.04
HPS4Q9NQG7 U6.42-201ENST00000618440 107 ntBASIC2.33□□□□□ -2.04
HPS4Q9NQG7 AC010378.1-201ENST00000619270 362 ntBASIC2.33□□□□□ -2.04
HPS4Q9NQG7 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.33□□□□□ -2.04
HPS4Q9NQG7 AC138649.3-201ENST00000622154 254 ntBASIC2.33□□□□□ -2.04
HPS4Q9NQG7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HPS4Q9NQG7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.33□□□□□ -2.04
HPS4Q9NQG7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HPS4Q9NQG7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
HPS4Q9NQG7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HPS4Q9NQG7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
HPS4Q9NQG7 AC005336.3-201ENST00000623833 2679 ntBASIC2.32□□□□□ -2.04
HPS4Q9NQG7 RNU6-486P-201ENST00000363116 107 ntBASIC2.32□□□□□ -2.04
HPS4Q9NQG7 Y_RNA.318-201ENST00000365131 97 ntBASIC2.32□□□□□ -2.04
HPS4Q9NQG7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
HPS4Q9NQG7 FTH1P15-201ENST00000406984 280 ntBASIC2.32□□□□□ -2.04
HPS4Q9NQG7 RN7SKP32-201ENST00000410167 303 ntBASIC2.32□□□□□ -2.04
HPS4Q9NQG7 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.32□□□□□ -2.04
HPS4Q9NQG7 BX295541.1-201ENST00000417774 250 ntBASIC2.32□□□□□ -2.04
HPS4Q9NQG7 AL591806.2-201ENST00000433122 173 ntBASIC2.32□□□□□ -2.04
HPS4Q9NQG7 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.32□□□□□ -2.04
HPS4Q9NQG7 AC244505.5-201ENST00000443639 207 ntBASIC2.32□□□□□ -2.04
HPS4Q9NQG7 TPT1P7-201ENST00000458300 517 ntBASIC2.32□□□□□ -2.04
HPS4Q9NQG7 ARL2BPP4-201ENST00000506854 471 ntBASIC2.32□□□□□ -2.04
HPS4Q9NQG7 RNA5SP112-201ENST00000515937 99 ntBASIC2.32□□□□□ -2.04
HPS4Q9NQG7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.32□□□□□ -2.04
HPS4Q9NQG7 AP003072.2-201ENST00000527756 676 ntBASIC2.32□□□□□ -2.04
HPS4Q9NQG7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.32□□□□□ -2.04
HPS4Q9NQG7 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.32□□□□□ -2.04
HPS4Q9NQG7 RPS3AP23-202ENST00000574601 686 ntBASIC2.32□□□□□ -2.04
HPS4Q9NQG7 AC012213.3-201ENST00000577199 777 ntBASIC2.32□□□□□ -2.04
HPS4Q9NQG7 MIR5694-201ENST00000581190 76 ntBASIC2.32□□□□□ -2.04
HPS4Q9NQG7 AC078899.2-201ENST00000595282 212 ntBASIC2.32□□□□□ -2.04
HPS4Q9NQG7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.32□□□□□ -2.04
HPS4Q9NQG7 AC025165.5-201ENST00000602802 578 ntBASIC2.32□□□□□ -2.04
HPS4Q9NQG7 AL670379.4-201ENST00000605279 254 ntBASIC2.32□□□□□ -2.04
HPS4Q9NQG7 AC069294.1-201ENST00000608397 350 ntBASIC2.32□□□□□ -2.04
HPS4Q9NQG7 AC006566.1-201ENST00000608943 513 ntBASIC2.32□□□□□ -2.04
HPS4Q9NQG7 AC138627.2-201ENST00000624202 601 ntBASIC2.32□□□□□ -2.04
HPS4Q9NQG7 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.32□□□□□ -2.04
HPS4Q9NQG7 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.32□□□□□ -2.04
HPS4Q9NQG7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HPS4Q9NQG7 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.31□□□□□ -2.04
HPS4Q9NQG7 SNORA3A-201ENST00000364113 130 ntBASIC2.31□□□□□ -2.04
HPS4Q9NQG7 RNU6-371P-201ENST00000364283 108 ntBASIC2.31□□□□□ -2.04
HPS4Q9NQG7 Y_RNA.367-201ENST00000365544 101 ntBASIC2.31□□□□□ -2.04
HPS4Q9NQG7 Y_RNA.436-201ENST00000384097 102 ntBASIC2.31□□□□□ -2.04
HPS4Q9NQG7 Y_RNA.576-201ENST00000384781 102 ntBASIC2.31□□□□□ -2.04
HPS4Q9NQG7 MIR578-201ENST00000384828 96 ntBASIC2.31□□□□□ -2.04
HPS4Q9NQG7 DEFB108C-201ENST00000400154 252 ntBASIC2.31□□□□□ -2.04
HPS4Q9NQG7 U6atac.2-201ENST00000408644 118 ntBASIC2.31□□□□□ -2.04
HPS4Q9NQG7 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.31□□□□□ -2.04
HPS4Q9NQG7 RNU6-387P-201ENST00000411331 105 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 180.8 ms