Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6□□□□□ -1.45
RTN4Q9NQC3 SCARNA17.1-201ENST00000516211 143 ntBASIC6□□□□□ -1.45
RTN4Q9NQC3 SCARNA17.2-201ENST00000516334 143 ntBASIC6□□□□□ -1.45
RTN4Q9NQC3 RN7SKP40-201ENST00000517211 242 ntBASIC6□□□□□ -1.45
RTN4Q9NQC3 AC055872.1-201ENST00000570978 278 ntBASIC6□□□□□ -1.45
RTN4Q9NQC3 MIR4271-201ENST00000582451 67 ntBASIC6□□□□□ -1.45
RTN4Q9NQC3 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6□□□□□ -1.45
RTN4Q9NQC3 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6□□□□□ -1.45
RTN4Q9NQC3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC6□□□□□ -1.45
RTN4Q9NQC3 AC109309.2-201ENST00000612597 332 ntBASIC6□□□□□ -1.45
RTN4Q9NQC3 SCARNA17.4-201ENST00000614296 143 ntBASIC6□□□□□ -1.45
RTN4Q9NQC3 MIR8058-201ENST00000615737 89 ntBASIC6□□□□□ -1.45
RTN4Q9NQC3 AC006133.1-201ENST00000617106 264 ntBASIC6□□□□□ -1.45
RTN4Q9NQC3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC6□□□□□ -1.45
RTN4Q9NQC3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
RTN4Q9NQC3 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RTN4Q9NQC3 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
RTN4Q9NQC3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
RTN4Q9NQC3 AP001486.2-201ENST00000561652 5113 ntBASIC5.99□□□□□ -1.45
RTN4Q9NQC3 U6atac.2-201ENST00000408644 118 ntBASIC5.99□□□□□ -1.45
RTN4Q9NQC3 ELOCP19-201ENST00000411919 318 ntBASIC5.99□□□□□ -1.45
RTN4Q9NQC3 RPL23AP3-201ENST00000453844 468 ntBASIC5.99□□□□□ -1.45
RTN4Q9NQC3 AC114982.1-201ENST00000469402 321 ntBASIC5.99□□□□□ -1.45
RTN4Q9NQC3 RPL27AP5-201ENST00000469428 449 ntBASIC5.99□□□□□ -1.45
RTN4Q9NQC3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC5.99□□□□□ -1.45
RTN4Q9NQC3 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.99□□□□□ -1.45
RTN4Q9NQC3 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.99□□□□□ -1.45
RTN4Q9NQC3 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.99□□□□□ -1.45
RTN4Q9NQC3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RTN4Q9NQC3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
RTN4Q9NQC3 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.99□□□□□ -1.45
RTN4Q9NQC3 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.98□□□□□ -1.45
RTN4Q9NQC3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC5.98□□□□□ -1.45
RTN4Q9NQC3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RTN4Q9NQC3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC5.98□□□□□ -1.45
RTN4Q9NQC3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RTN4Q9NQC3 AC139713.2-215ENST00000641428 5037 ntBASIC5.98□□□□□ -1.45
RTN4Q9NQC3 RNY4P28-201ENST00000365281 93 ntBASIC5.98□□□□□ -1.45
RTN4Q9NQC3 RNU6-1289P-201ENST00000384431 106 ntBASIC5.98□□□□□ -1.45
RTN4Q9NQC3 AL357075.1-201ENST00000404107 726 ntBASIC5.98□□□□□ -1.45
RTN4Q9NQC3 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.98□□□□□ -1.45
RTN4Q9NQC3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC5.98□□□□□ -1.45
RTN4Q9NQC3 RPL23AP52-201ENST00000439311 478 ntBASIC5.98□□□□□ -1.45
RTN4Q9NQC3 RNA5SP249-201ENST00000516127 99 ntBASIC5.98□□□□□ -1.45
RTN4Q9NQC3 RNU2-12P-201ENST00000517216 168 ntBASIC5.98□□□□□ -1.45
RTN4Q9NQC3 DEFB131C-201ENST00000528817 165 ntBASIC5.98□□□□□ -1.45
RTN4Q9NQC3 AP005403.1-201ENST00000579720 229 ntBASIC5.98□□□□□ -1.45
RTN4Q9NQC3 AC244107.2-201ENST00000611773 76 ntBASIC5.98□□□□□ -1.45
RTN4Q9NQC3 MIR6839-201ENST00000620425 113 ntBASIC5.98□□□□□ -1.45
RTN4Q9NQC3 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
RTN4Q9NQC3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RTN4Q9NQC3 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RTN4Q9NQC3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RTN4Q9NQC3 AC135776.4-201ENST00000624300 1904 ntBASIC5.97□□□□□ -1.45
RTN4Q9NQC3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RTN4Q9NQC3 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
RTN4Q9NQC3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC5.97□□□□□ -1.45
RTN4Q9NQC3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
RTN4Q9NQC3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RTN4Q9NQC3 Y_RNA.76-201ENST00000362931 109 ntBASIC5.97□□□□□ -1.45
RTN4Q9NQC3 RNU1-65P-201ENST00000363919 148 ntBASIC5.97□□□□□ -1.45
RTN4Q9NQC3 RNU6-710P-201ENST00000410424 105 ntBASIC5.97□□□□□ -1.45
RTN4Q9NQC3 Y_RNA.597-201ENST00000410463 100 ntBASIC5.97□□□□□ -1.45
RTN4Q9NQC3 AC126124.2-201ENST00000413542 321 ntBASIC5.97□□□□□ -1.45
RTN4Q9NQC3 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.97□□□□□ -1.45
RTN4Q9NQC3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC5.97□□□□□ -1.45
RTN4Q9NQC3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.97□□□□□ -1.45
RTN4Q9NQC3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.97□□□□□ -1.45
RTN4Q9NQC3 AL162591.2-201ENST00000449634 317 ntBASIC5.97□□□□□ -1.45
RTN4Q9NQC3 AC027308.1-201ENST00000517993 110 ntBASIC5.97□□□□□ -1.45
RTN4Q9NQC3 AC107958.1-201ENST00000556576 290 ntBASIC5.97□□□□□ -1.45
RTN4Q9NQC3 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.97□□□□□ -1.45
RTN4Q9NQC3 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.97□□□□□ -1.45
RTN4Q9NQC3 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.97□□□□□ -1.45
RTN4Q9NQC3 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RTN4Q9NQC3 SCN1A-220ENST00000641603 12506 ntBASIC5.96□□□□□ -1.45
RTN4Q9NQC3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
RTN4Q9NQC3 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.45
RTN4Q9NQC3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RTN4Q9NQC3 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.96□□□□□ -1.46
RTN4Q9NQC3 RNU6-1062P-201ENST00000383908 107 ntBASIC5.96□□□□□ -1.46
RTN4Q9NQC3 Y_RNA.626-201ENST00000411288 95 ntBASIC5.96□□□□□ -1.46
RTN4Q9NQC3 AC004866.1-201ENST00000411748 78 ntBASIC5.96□□□□□ -1.46
RTN4Q9NQC3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
RTN4Q9NQC3 AC140059.1-201ENST00000489238 361 ntBASIC5.96□□□□□ -1.46
RTN4Q9NQC3 AC083906.5-201ENST00000503722 328 ntBASIC5.96□□□□□ -1.46
RTN4Q9NQC3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RTN4Q9NQC3 AC011853.1-201ENST00000518911 454 ntBASIC5.96□□□□□ -1.46
RTN4Q9NQC3 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.96□□□□□ -1.46
RTN4Q9NQC3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RTN4Q9NQC3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RTN4Q9NQC3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
RTN4Q9NQC3 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.95□□□□□ -1.46
RTN4Q9NQC3 RNU6-1199P-201ENST00000411249 104 ntBASIC5.95□□□□□ -1.46
RTN4Q9NQC3 AC009237.10-201ENST00000414112 510 ntBASIC5.95□□□□□ -1.46
RTN4Q9NQC3 AC092647.2-201ENST00000452998 253 ntBASIC5.95□□□□□ -1.46
RTN4Q9NQC3 RBMY2UP-201ENST00000453474 324 ntBASIC5.95□□□□□ -1.46
RTN4Q9NQC3 RNU6-191P-201ENST00000516295 94 ntBASIC5.95□□□□□ -1.46
RTN4Q9NQC3 SNORA70.20-201ENST00000516848 126 ntBASIC5.95□□□□□ -1.46
RTN4Q9NQC3 SCARNA3-201ENST00000517097 143 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms