Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.65□□□□□ -1.99
SIX2Q9NPC8 LRRC37A5P-203ENST00000580181 585 ntBASIC2.65□□□□□ -1.99
SIX2Q9NPC8 HSPE1P7-201ENST00000604681 321 ntBASIC2.65□□□□□ -1.99
SIX2Q9NPC8 CTHRC1P1-201ENST00000605383 469 ntBASIC2.65□□□□□ -1.99
SIX2Q9NPC8 AC008962.1-201ENST00000605729 304 ntBASIC2.65□□□□□ -1.99
SIX2Q9NPC8 AC104260.1-201ENST00000616660 539 ntBASIC2.65□□□□□ -1.99
SIX2Q9NPC8 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SIX2Q9NPC8 AC007256.1-201ENST00000392253 2765 ntBASIC2.65□□□□□ -1.99
SIX2Q9NPC8 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.65□□□□□ -1.99
SIX2Q9NPC8 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SIX2Q9NPC8 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
SIX2Q9NPC8 RNU6-845P-201ENST00000362578 103 ntBASIC2.64□□□□□ -1.99
SIX2Q9NPC8 SNORD3E-201ENST00000362899 217 ntBASIC2.64□□□□□ -1.99
SIX2Q9NPC8 RNU6-1303P-201ENST00000364841 107 ntBASIC2.64□□□□□ -1.99
SIX2Q9NPC8 RNU6-1179P-201ENST00000384667 107 ntBASIC2.64□□□□□ -1.99
SIX2Q9NPC8 EIF4E2P1-201ENST00000393781 255 ntBASIC2.64□□□□□ -1.99
SIX2Q9NPC8 RNU2-3P-201ENST00000410144 191 ntBASIC2.64□□□□□ -1.99
SIX2Q9NPC8 RNU6-607P-201ENST00000411283 108 ntBASIC2.64□□□□□ -1.99
SIX2Q9NPC8 Z92545.1-201ENST00000411782 234 ntBASIC2.64□□□□□ -1.99
SIX2Q9NPC8 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SIX2Q9NPC8 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.64□□□□□ -1.99
SIX2Q9NPC8 RPL7P12-201ENST00000446719 750 ntBASIC2.64□□□□□ -1.99
SIX2Q9NPC8 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SIX2Q9NPC8 RPL30P14-201ENST00000482744 348 ntBASIC2.64□□□□□ -1.99
SIX2Q9NPC8 AC114781.4-201ENST00000513707 639 ntBASIC2.64□□□□□ -1.99
SIX2Q9NPC8 AC046134.1-201ENST00000514454 666 ntBASIC2.64□□□□□ -1.99
SIX2Q9NPC8 SNORA14.1-201ENST00000516113 141 ntBASIC2.64□□□□□ -1.99
SIX2Q9NPC8 RNU6-928P-201ENST00000516876 104 ntBASIC2.64□□□□□ -1.99
SIX2Q9NPC8 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.64□□□□□ -1.99
SIX2Q9NPC8 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.64□□□□□ -1.99
SIX2Q9NPC8 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.64□□□□□ -1.99
SIX2Q9NPC8 AC087241.2-201ENST00000535801 324 ntBASIC2.64□□□□□ -1.99
SIX2Q9NPC8 MIR3609-201ENST00000582661 80 ntBASIC2.64□□□□□ -1.99
SIX2Q9NPC8 AL137843.1-201ENST00000605078 385 ntBASIC2.64□□□□□ -1.99
SIX2Q9NPC8 LARP7P1-201ENST00000605576 316 ntBASIC2.64□□□□□ -1.99
SIX2Q9NPC8 AC009994.1-201ENST00000606889 253 ntBASIC2.64□□□□□ -1.99
SIX2Q9NPC8 Z82243.1-201ENST00000609432 473 ntBASIC2.64□□□□□ -1.99
SIX2Q9NPC8 AC025253.1-201ENST00000613623 543 ntBASIC2.64□□□□□ -1.99
SIX2Q9NPC8 AC093913.1-201ENST00000614178 329 ntBASIC2.64□□□□□ -1.99
SIX2Q9NPC8 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.64□□□□□ -1.99
SIX2Q9NPC8 U2.21-201ENST00000637295 81 ntBASIC2.64□□□□□ -1.99
SIX2Q9NPC8 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.64□□□□□ -1.99
SIX2Q9NPC8 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SIX2Q9NPC8 AL136164.4-201ENST00000625013 2135 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
SIX2Q9NPC8 MTND4P12-201ENST00000498999 1377 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 AC016717.2-201ENST00000609089 5141 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.63□□□□□ -1.99
SIX2Q9NPC8 MIR412-201ENST00000362142 91 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 Y_RNA.166-201ENST00000363730 102 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 Y_RNA.414-201ENST00000384011 101 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 RNU6-831P-201ENST00000384548 107 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 RNU6-510P-201ENST00000391239 108 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 SNORA40C-201ENST00000391285 128 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 RNA5SP184-201ENST00000411071 108 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 RPL7P10-201ENST00000417407 739 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 PDCL2P1-201ENST00000419302 352 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 HSPE1P1-201ENST00000421494 318 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 AC098614.2-201ENST00000426040 255 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.63□□□□□ -1.99
SIX2Q9NPC8 IFNA20P-201ENST00000436840 528 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.63□□□□□ -1.99
SIX2Q9NPC8 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.63□□□□□ -1.99
SIX2Q9NPC8 BRK1P2-201ENST00000442875 223 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.63□□□□□ -1.99
SIX2Q9NPC8 AC087884.1-201ENST00000469738 328 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 RPS26P21-201ENST00000475397 348 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 HMGB1P30-201ENST00000492455 606 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 RNU1-86P-201ENST00000516108 154 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 RNU1-107P-201ENST00000516617 154 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 SNORA31.19-201ENST00000517079 126 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.63□□□□□ -1.99
SIX2Q9NPC8 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.63□□□□□ -1.99
SIX2Q9NPC8 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.63□□□□□ -1.99
SIX2Q9NPC8 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.63□□□□□ -1.99
SIX2Q9NPC8 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.63□□□□□ -1.99
SIX2Q9NPC8 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.63□□□□□ -1.99
SIX2Q9NPC8 MIR3941-201ENST00000582572 103 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.63□□□□□ -1.99
SIX2Q9NPC8 BNIP3P22-201ENST00000593399 556 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 AL645944.1-201ENST00000603857 493 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 AL137847.3-201ENST00000611521 109 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 AC063943.3-201ENST00000615562 356 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 RMST_4.1-201ENST00000616886 107 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 AC068831.7-201ENST00000616954 363 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 AL031601.2-202ENST00000622650 282 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 AC092608.2-201ENST00000624427 218 ntBASIC2.63□□□□□ -1.99
SIX2Q9NPC8 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
SIX2Q9NPC8 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SIX2Q9NPC8 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.62□□□□□ -1.99
SIX2Q9NPC8 RNA5SP295-201ENST00000362655 121 ntBASIC2.62□□□□□ -1.99
SIX2Q9NPC8 Y_RNA.480-201ENST00000384364 102 ntBASIC2.62□□□□□ -1.99
SIX2Q9NPC8 MIR483-201ENST00000385070 76 ntBASIC2.62□□□□□ -1.99
SIX2Q9NPC8 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SIX2Q9NPC8 MIR888-201ENST00000401186 77 ntBASIC2.62□□□□□ -1.99
SIX2Q9NPC8 AL078595.1-201ENST00000404458 226 ntBASIC2.62□□□□□ -1.99
SIX2Q9NPC8 RNA5SP181-201ENST00000410246 98 ntBASIC2.62□□□□□ -1.99
SIX2Q9NPC8 CYCSP33-201ENST00000414485 327 ntBASIC2.62□□□□□ -1.99
SIX2Q9NPC8 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.62□□□□□ -1.99
SIX2Q9NPC8 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms