Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC109327.1-201ENST00000471666 403 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 AC109925.1-201ENST00000478069 331 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 RNU6-346P-201ENST00000516288 111 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 Y_RNA.777-201ENST00000516982 102 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.09□□□□□ -1.75
SSU72Q9NP77 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SSU72Q9NP77 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.09□□□□□ -1.75
SSU72Q9NP77 UBL5P4-201ENST00000562584 236 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.09□□□□□ -1.75
SSU72Q9NP77 AC136624.4-201ENST00000573044 370 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.09□□□□□ -1.75
SSU72Q9NP77 AC020895.1-201ENST00000595362 272 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 Y_RNA.771-201ENST00000598668 102 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 MZT1P2-201ENST00000604387 248 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 Y_RNA.789-201ENST00000622480 102 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.09□□□□□ -1.75
SSU72Q9NP77 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.09□□□□□ -1.75
SSU72Q9NP77 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.08□□□□□ -1.76
SSU72Q9NP77 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.08□□□□□ -1.76
SSU72Q9NP77 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSU72Q9NP77 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSU72Q9NP77 RNU6-1020P-201ENST00000363684 107 ntBASIC4.08□□□□□ -1.76
SSU72Q9NP77 RN7SKP280-201ENST00000364196 304 ntBASIC4.08□□□□□ -1.76
SSU72Q9NP77 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
SSU72Q9NP77 RNU6-217P-201ENST00000384164 104 ntBASIC4.08□□□□□ -1.76
SSU72Q9NP77 RNU6-1001P-201ENST00000411265 100 ntBASIC4.08□□□□□ -1.76
SSU72Q9NP77 AL353743.1-202ENST00000431724 1695 ntBASIC4.08□□□□□ -1.76
SSU72Q9NP77 AC007969.2-201ENST00000441891 191 ntBASIC4.08□□□□□ -1.76
SSU72Q9NP77 TMSB4XP3-201ENST00000445144 114 ntBASIC4.08□□□□□ -1.76
SSU72Q9NP77 MTATP6P7-201ENST00000453315 681 ntBASIC4.08□□□□□ -1.76
SSU72Q9NP77 RNA5SP246-201ENST00000458909 119 ntBASIC4.08□□□□□ -1.76
SSU72Q9NP77 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.08□□□□□ -1.76
SSU72Q9NP77 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.08□□□□□ -1.76
SSU72Q9NP77 RNU6-1278P-201ENST00000516130 107 ntBASIC4.08□□□□□ -1.76
SSU72Q9NP77 RNU6-1073P-201ENST00000517182 106 ntBASIC4.08□□□□□ -1.76
SSU72Q9NP77 MTND5P41-201ENST00000517498 206 ntBASIC4.08□□□□□ -1.76
SSU72Q9NP77 AC051619.2-201ENST00000559063 397 ntBASIC4.08□□□□□ -1.76
SSU72Q9NP77 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.08□□□□□ -1.76
SSU72Q9NP77 KLKP1-201ENST00000595979 403 ntBASIC4.08□□□□□ -1.76
SSU72Q9NP77 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.08□□□□□ -1.76
SSU72Q9NP77 AC005296.1-201ENST00000616145 209 ntBASIC4.08□□□□□ -1.76
SSU72Q9NP77 MIR6729-201ENST00000618194 65 ntBASIC4.08□□□□□ -1.76
SSU72Q9NP77 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.08□□□□□ -1.76
SSU72Q9NP77 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.08□□□□□ -1.76
SSU72Q9NP77 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.08□□□□□ -1.76
SSU72Q9NP77 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SSU72Q9NP77 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSU72Q9NP77 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSU72Q9NP77 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.07□□□□□ -1.76
SSU72Q9NP77 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSU72Q9NP77 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSU72Q9NP77 UBE2WP1-201ENST00000362030 340 ntBASIC4.07□□□□□ -1.76
SSU72Q9NP77 RNU6-858P-201ENST00000362436 107 ntBASIC4.07□□□□□ -1.76
SSU72Q9NP77 SNORA51.1-201ENST00000363243 140 ntBASIC4.07□□□□□ -1.76
SSU72Q9NP77 RNY1P5-201ENST00000383890 115 ntBASIC4.07□□□□□ -1.76
SSU72Q9NP77 RNU6-20P-201ENST00000384106 107 ntBASIC4.07□□□□□ -1.76
SSU72Q9NP77 RNU6-658P-201ENST00000384606 106 ntBASIC4.07□□□□□ -1.76
SSU72Q9NP77 RNU6-159P-201ENST00000391080 106 ntBASIC4.07□□□□□ -1.76
SSU72Q9NP77 RNU2-61P-201ENST00000411069 191 ntBASIC4.07□□□□□ -1.76
SSU72Q9NP77 AC016769.2-201ENST00000414815 475 ntBASIC4.07□□□□□ -1.76
SSU72Q9NP77 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.07□□□□□ -1.76
SSU72Q9NP77 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.07□□□□□ -1.76
SSU72Q9NP77 AC124916.1-201ENST00000444020 547 ntBASIC4.07□□□□□ -1.76
SSU72Q9NP77 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.07□□□□□ -1.76
SSU72Q9NP77 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.07□□□□□ -1.76
SSU72Q9NP77 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.07□□□□□ -1.76
SSU72Q9NP77 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.07□□□□□ -1.76
SSU72Q9NP77 RN7SL691P-201ENST00000494487 301 ntBASIC4.07□□□□□ -1.76
SSU72Q9NP77 AC091959.1-201ENST00000495857 238 ntBASIC4.07□□□□□ -1.76
SSU72Q9NP77 AC026726.1-201ENST00000512859 601 ntBASIC4.07□□□□□ -1.76
SSU72Q9NP77 RNU7-200P-201ENST00000516105 62 ntBASIC4.07□□□□□ -1.76
SSU72Q9NP77 RNU7-110P-201ENST00000516891 62 ntBASIC4.07□□□□□ -1.76
SSU72Q9NP77 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSU72Q9NP77 AL391261.3-201ENST00000557194 520 ntBASIC4.07□□□□□ -1.76
SSU72Q9NP77 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.07□□□□□ -1.76
SSU72Q9NP77 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.07□□□□□ -1.76
SSU72Q9NP77 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.07□□□□□ -1.76
SSU72Q9NP77 AL023881.1-201ENST00000621088 301 ntBASIC4.07□□□□□ -1.76
SSU72Q9NP77 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.07□□□□□ -1.76
SSU72Q9NP77 U6.106-201ENST00000636360 105 ntBASIC4.07□□□□□ -1.76
SSU72Q9NP77 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSU72Q9NP77 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSU72Q9NP77 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSU72Q9NP77 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
SSU72Q9NP77 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.07□□□□□ -1.76
SSU72Q9NP77 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSU72Q9NP77 AC008725.1-201ENST00000605123 2263 ntBASIC4.06□□□□□ -1.76
SSU72Q9NP77 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SSU72Q9NP77 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SSU72Q9NP77 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSU72Q9NP77 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSU72Q9NP77 RNA5SP502-201ENST00000362694 119 ntBASIC4.06□□□□□ -1.76
SSU72Q9NP77 Y_RNA.383-201ENST00000383855 97 ntBASIC4.06□□□□□ -1.76
SSU72Q9NP77 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSU72Q9NP77 HLFP1-201ENST00000402375 499 ntBASIC4.06□□□□□ -1.76
SSU72Q9NP77 AL138878.1-201ENST00000405131 347 ntBASIC4.06□□□□□ -1.76
SSU72Q9NP77 MIR1251-201ENST00000408552 70 ntBASIC4.06□□□□□ -1.76
SSU72Q9NP77 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.06□□□□□ -1.76
SSU72Q9NP77 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms