Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 BX510359.4-201ENST00000423750 193 ntBASIC1.33□□□□□ -2.2
ALX4Q9H161 AC092648.1-201ENST00000425870 423 ntBASIC1.33□□□□□ -2.2
ALX4Q9H161 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.33□□□□□ -2.2
ALX4Q9H161 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.33□□□□□ -2.2
ALX4Q9H161 AC012308.1-201ENST00000451232 178 ntBASIC1.33□□□□□ -2.2
ALX4Q9H161 MTATP6P14-201ENST00000455189 673 ntBASIC1.33□□□□□ -2.2
ALX4Q9H161 SNORD13-201ENST00000459299 104 ntBASIC1.33□□□□□ -2.2
ALX4Q9H161 AC006512.1-201ENST00000468816 291 ntBASIC1.33□□□□□ -2.2
ALX4Q9H161 RNU2-53P-201ENST00000516257 147 ntBASIC1.33□□□□□ -2.2
ALX4Q9H161 RNU6-667P-201ENST00000517186 102 ntBASIC1.33□□□□□ -2.2
ALX4Q9H161 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.33□□□□□ -2.2
ALX4Q9H161 AP005597.4-201ENST00000526762 229 ntBASIC1.33□□□□□ -2.2
ALX4Q9H161 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.33□□□□□ -2.2
ALX4Q9H161 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.33□□□□□ -2.2
ALX4Q9H161 AC092325.1-201ENST00000566449 554 ntBASIC1.33□□□□□ -2.2
ALX4Q9H161 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.33□□□□□ -2.2
ALX4Q9H161 MIR4509-3-201ENST00000578671 94 ntBASIC1.33□□□□□ -2.2
ALX4Q9H161 MIR4509-2-201ENST00000583920 94 ntBASIC1.33□□□□□ -2.2
ALX4Q9H161 AP000942.3-201ENST00000603702 160 ntBASIC1.33□□□□□ -2.2
ALX4Q9H161 AC144521.1-201ENST00000607148 956 ntBASIC1.33□□□□□ -2.2
ALX4Q9H161 uc_338.15-201ENST00000615470 191 ntBASIC1.33□□□□□ -2.2
ALX4Q9H161 MIR4509-1-201ENST00000618224 94 ntBASIC1.33□□□□□ -2.2
ALX4Q9H161 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
ALX4Q9H161 HAUS6P2-201ENST00000433254 2404 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
ALX4Q9H161 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
ALX4Q9H161 ZNF876P-202ENST00000398732 1485 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 RNU6-931P-201ENST00000363850 107 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 RNU6-960P-201ENST00000364056 120 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 Y_RNA.338-201ENST00000365320 114 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 RNU6-487P-201ENST00000365430 104 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 RNU6-190P-201ENST00000384154 102 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 RNU6-843P-201ENST00000384454 104 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 MIR29C-201ENST00000385231 88 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 RNU6-1242P-201ENST00000391052 103 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 AC006366.1-201ENST00000422002 759 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.32□□□□□ -2.2
ALX4Q9H161 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.32□□□□□ -2.2
ALX4Q9H161 USP9YP17-201ENST00000444617 696 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 USP9YP25-201ENST00000457708 443 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 AC098862.1-201ENST00000504991 413 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 AC112206.4-201ENST00000515142 405 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 RNU2-10P-201ENST00000516375 211 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 SNORA44.1-201ENST00000517031 108 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 RNU6-1003P-201ENST00000517099 105 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 AC093249.1-201ENST00000567049 203 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 AC025678.1-201ENST00000567861 338 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 MIR4255-201ENST00000579351 72 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.32□□□□□ -2.2
ALX4Q9H161 AC016727.1-205ENST00000605437 569 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 PRR13P7-201ENST00000605538 430 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 MIR15A-201ENST00000607334 83 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 AC108747.1-201ENST00000609508 535 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 AL157392.4-201ENST00000609756 345 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
ALX4Q9H161 AC021755.4-201ENST00000616620 456 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 AL359314.1-201ENST00000616913 261 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 AC108479.2-201ENST00000617314 601 ntBASIC1.32□□□□□ -2.2
ALX4Q9H161 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
ALX4Q9H161 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.32□□□□□ -2.2
ALX4Q9H161 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
ALX4Q9H161 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.32□□□□□ -2.2
ALX4Q9H161 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
ALX4Q9H161 RNU6-946P-201ENST00000383878 107 ntBASIC1.31□□□□□ -2.2
ALX4Q9H161 MIR122-201ENST00000385044 85 ntBASIC1.31□□□□□ -2.2
ALX4Q9H161 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
ALX4Q9H161 AC092809.3-201ENST00000415453 231 ntBASIC1.31□□□□□ -2.2
ALX4Q9H161 MTCO2P21-201ENST00000419780 677 ntBASIC1.31□□□□□ -2.2
ALX4Q9H161 AL022400.1-201ENST00000423946 935 ntBASIC1.31□□□□□ -2.2
ALX4Q9H161 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.31□□□□□ -2.2
ALX4Q9H161 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.31□□□□□ -2.2
ALX4Q9H161 SSXP1-201ENST00000453640 473 ntBASIC1.31□□□□□ -2.2
ALX4Q9H161 AC023790.1-201ENST00000482174 347 ntBASIC1.31□□□□□ -2.2
ALX4Q9H161 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.31□□□□□ -2.2
ALX4Q9H161 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
ALX4Q9H161 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.31□□□□□ -2.2
ALX4Q9H161 RNU6-201P-201ENST00000517100 61 ntBASIC1.31□□□□□ -2.2
ALX4Q9H161 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.31□□□□□ -2.2
ALX4Q9H161 CYCSP27-201ENST00000527643 293 ntBASIC1.31□□□□□ -2.2
ALX4Q9H161 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.31□□□□□ -2.2
ALX4Q9H161 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.31□□□□□ -2.2
ALX4Q9H161 AP000763.2-201ENST00000540641 163 ntBASIC1.31□□□□□ -2.2
ALX4Q9H161 AC135279.1-201ENST00000543493 504 ntBASIC1.31□□□□□ -2.2
ALX4Q9H161 AC123904.2-201ENST00000548059 300 ntBASIC1.31□□□□□ -2.2
ALX4Q9H161 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.31□□□□□ -2.2
ALX4Q9H161 AC008269.2-201ENST00000561915 1105 ntBASIC1.31□□□□□ -2.2
ALX4Q9H161 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
ALX4Q9H161 BNIP3P30-201ENST00000601184 574 ntBASIC1.31□□□□□ -2.2
ALX4Q9H161 RNU4-5P-201ENST00000607255 135 ntBASIC1.31□□□□□ -2.2
ALX4Q9H161 AC103706.2-201ENST00000638080 240 ntBASIC1.31□□□□□ -2.2
ALX4Q9H161 MTND4P16-201ENST00000466108 1367 ntBASIC1.31□□□□□ -2.2
ALX4Q9H161 RNU6-529P-201ENST00000363383 104 ntBASIC1.3□□□□□ -2.2
ALX4Q9H161 RNA5SP465-201ENST00000391195 109 ntBASIC1.3□□□□□ -2.2
ALX4Q9H161 BTF3L4P2-201ENST00000392798 346 ntBASIC1.3□□□□□ -2.2
ALX4Q9H161 RNU2-48P-201ENST00000410694 191 ntBASIC1.3□□□□□ -2.2
ALX4Q9H161 UBE2V1P10-201ENST00000414685 269 ntBASIC1.3□□□□□ -2.2
ALX4Q9H161 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.3□□□□□ -2.2
ALX4Q9H161 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms