Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
SALL3Q9BXA9 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SALL3Q9BXA9 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SALL3Q9BXA9 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SALL3Q9BXA9 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SALL3Q9BXA9 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
SALL3Q9BXA9 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SALL3Q9BXA9 Y_RNA.149-201ENST00000363558 117 ntBASIC3.63□□□□□ -1.83
SALL3Q9BXA9 RNU6-14P-201ENST00000384630 106 ntBASIC3.63□□□□□ -1.83
SALL3Q9BXA9 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SALL3Q9BXA9 SNORA48.2-201ENST00000390926 124 ntBASIC3.63□□□□□ -1.83
SALL3Q9BXA9 AC114482.1-201ENST00000418010 247 ntBASIC3.63□□□□□ -1.83
SALL3Q9BXA9 AC004866.2-201ENST00000438285 481 ntBASIC3.63□□□□□ -1.83
SALL3Q9BXA9 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.63□□□□□ -1.83
SALL3Q9BXA9 NEFMP1-201ENST00000443423 1006 ntBASIC3.63□□□□□ -1.83
SALL3Q9BXA9 HMGN2P16-201ENST00000456802 261 ntBASIC3.63□□□□□ -1.83
SALL3Q9BXA9 RNU6-953P-201ENST00000459154 107 ntBASIC3.63□□□□□ -1.83
SALL3Q9BXA9 MIR2053-201ENST00000459295 91 ntBASIC3.63□□□□□ -1.83
SALL3Q9BXA9 RPL37P6-201ENST00000460682 294 ntBASIC3.63□□□□□ -1.83
SALL3Q9BXA9 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.63□□□□□ -1.83
SALL3Q9BXA9 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.63□□□□□ -1.83
SALL3Q9BXA9 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.63□□□□□ -1.83
SALL3Q9BXA9 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SALL3Q9BXA9 SNORA31.3-201ENST00000516029 96 ntBASIC3.63□□□□□ -1.83
SALL3Q9BXA9 RNU6-677P-201ENST00000516914 101 ntBASIC3.63□□□□□ -1.83
SALL3Q9BXA9 RNU6-1213P-201ENST00000517075 94 ntBASIC3.63□□□□□ -1.83
SALL3Q9BXA9 RNA5SP380-201ENST00000517190 98 ntBASIC3.63□□□□□ -1.83
SALL3Q9BXA9 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.63□□□□□ -1.83
SALL3Q9BXA9 AC011890.2-201ENST00000613393 294 ntBASIC3.63□□□□□ -1.83
SALL3Q9BXA9 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.63□□□□□ -1.83
SALL3Q9BXA9 AL450472.3-201ENST00000615578 367 ntBASIC3.63□□□□□ -1.83
SALL3Q9BXA9 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.63□□□□□ -1.83
SALL3Q9BXA9 Z69720.2-201ENST00000624755 279 ntBASIC3.63□□□□□ -1.83
SALL3Q9BXA9 ZNF807-201ENST00000328088 1707 ntBASIC3.63□□□□□ -1.83
SALL3Q9BXA9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SALL3Q9BXA9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SALL3Q9BXA9 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SALL3Q9BXA9 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.62□□□□□ -1.83
SALL3Q9BXA9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SALL3Q9BXA9 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SALL3Q9BXA9 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
SALL3Q9BXA9 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.62□□□□□ -1.83
SALL3Q9BXA9 RNU1-115P-201ENST00000365329 160 ntBASIC3.62□□□□□ -1.83
SALL3Q9BXA9 RNU6-890P-201ENST00000384121 107 ntBASIC3.62□□□□□ -1.83
SALL3Q9BXA9 RNU6-817P-201ENST00000391083 104 ntBASIC3.62□□□□□ -1.83
SALL3Q9BXA9 AP000567.1-201ENST00000406413 156 ntBASIC3.62□□□□□ -1.83
SALL3Q9BXA9 MIR1302-3-201ENST00000408128 138 ntBASIC3.62□□□□□ -1.83
SALL3Q9BXA9 RNA5SP111-201ENST00000411386 101 ntBASIC3.62□□□□□ -1.83
SALL3Q9BXA9 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.62□□□□□ -1.83
SALL3Q9BXA9 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.62□□□□□ -1.83
SALL3Q9BXA9 AL359672.1-201ENST00000442302 409 ntBASIC3.62□□□□□ -1.83
SALL3Q9BXA9 SNORD5.1-201ENST00000458800 75 ntBASIC3.62□□□□□ -1.83
SALL3Q9BXA9 snoU13.4-201ENST00000458916 104 ntBASIC3.62□□□□□ -1.83
SALL3Q9BXA9 RPS29P26-201ENST00000477483 171 ntBASIC3.62□□□□□ -1.83
SALL3Q9BXA9 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.62□□□□□ -1.83
SALL3Q9BXA9 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.62□□□□□ -1.83
SALL3Q9BXA9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.62□□□□□ -1.83
SALL3Q9BXA9 RNU6-470P-201ENST00000515954 104 ntBASIC3.62□□□□□ -1.83
SALL3Q9BXA9 RN7SKP258-201ENST00000517151 304 ntBASIC3.62□□□□□ -1.83
SALL3Q9BXA9 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.62□□□□□ -1.83
SALL3Q9BXA9 AC026371.1-201ENST00000551867 419 ntBASIC3.62□□□□□ -1.83
SALL3Q9BXA9 OR4H12P-201ENST00000556269 907 ntBASIC3.62□□□□□ -1.83
SALL3Q9BXA9 AC008269.2-201ENST00000561915 1105 ntBASIC3.62□□□□□ -1.83
SALL3Q9BXA9 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
SALL3Q9BXA9 AC012669.1-201ENST00000603209 283 ntBASIC3.62□□□□□ -1.83
SALL3Q9BXA9 AL158032.1-201ENST00000605401 106 ntBASIC3.62□□□□□ -1.83
SALL3Q9BXA9 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.62□□□□□ -1.83
SALL3Q9BXA9 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.62□□□□□ -1.83
SALL3Q9BXA9 U2.22-201ENST00000636441 106 ntBASIC3.62□□□□□ -1.83
SALL3Q9BXA9 U6.98-201ENST00000637157 84 ntBASIC3.62□□□□□ -1.83
SALL3Q9BXA9 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SALL3Q9BXA9 AL672296.1-201ENST00000427780 2158 ntBASIC3.62□□□□□ -1.83
SALL3Q9BXA9 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.61□□□□□ -1.83
SALL3Q9BXA9 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.61□□□□□ -1.83
SALL3Q9BXA9 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SALL3Q9BXA9 SNORD62.1-201ENST00000362541 86 ntBASIC3.61□□□□□ -1.83
SALL3Q9BXA9 Y_RNA.193-201ENST00000363979 102 ntBASIC3.61□□□□□ -1.83
SALL3Q9BXA9 RNU6-214P-201ENST00000384130 107 ntBASIC3.61□□□□□ -1.83
SALL3Q9BXA9 Y_RNA.480-201ENST00000384364 102 ntBASIC3.61□□□□□ -1.83
SALL3Q9BXA9 RNY1P14-201ENST00000384426 108 ntBASIC3.61□□□□□ -1.83
SALL3Q9BXA9 MIR181B1-201ENST00000385240 110 ntBASIC3.61□□□□□ -1.83
SALL3Q9BXA9 RNA5SP274-201ENST00000410484 108 ntBASIC3.61□□□□□ -1.83
SALL3Q9BXA9 Y_RNA.618-201ENST00000410949 107 ntBASIC3.61□□□□□ -1.83
SALL3Q9BXA9 RPL7P37-201ENST00000425095 738 ntBASIC3.61□□□□□ -1.83
SALL3Q9BXA9 USP9YP16-201ENST00000430287 407 ntBASIC3.61□□□□□ -1.83
SALL3Q9BXA9 AL160004.2-201ENST00000432935 350 ntBASIC3.61□□□□□ -1.83
SALL3Q9BXA9 AL731563.1-201ENST00000442202 214 ntBASIC3.61□□□□□ -1.83
SALL3Q9BXA9 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.61□□□□□ -1.83
SALL3Q9BXA9 USP9YP23-201ENST00000455085 407 ntBASIC3.61□□□□□ -1.83
SALL3Q9BXA9 AC128713.1-201ENST00000471495 306 ntBASIC3.61□□□□□ -1.83
SALL3Q9BXA9 AP004217.1-201ENST00000480579 346 ntBASIC3.61□□□□□ -1.83
SALL3Q9BXA9 AC116655.1-201ENST00000508324 901 ntBASIC3.61□□□□□ -1.83
SALL3Q9BXA9 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.61□□□□□ -1.83
SALL3Q9BXA9 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.61□□□□□ -1.83
SALL3Q9BXA9 TBCAP3-201ENST00000512475 312 ntBASIC3.61□□□□□ -1.83
SALL3Q9BXA9 AC110588.1-201ENST00000559699 137 ntBASIC3.61□□□□□ -1.83
SALL3Q9BXA9 AC104984.5-201ENST00000586878 94 ntBASIC3.61□□□□□ -1.83
SALL3Q9BXA9 PRR13P7-201ENST00000605538 430 ntBASIC3.61□□□□□ -1.83
SALL3Q9BXA9 AC009229.3-201ENST00000608056 282 ntBASIC3.61□□□□□ -1.83
SALL3Q9BXA9 AL162373.1-201ENST00000620433 407 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms