Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 OR11H5P-201ENST00000554039 926 ntBASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 DISC2.1-201ENST00000612827 205 ntBASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 MIR1321-201ENST00000637766 79 ntBASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 MIR622-201ENST00000638396 96 ntBASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 RNU6-1068P-201ENST00000410958 103 ntBASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 RNU6-1245P-201ENST00000411130 106 ntBASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 AC096664.2-201ENST00000411843 406 ntBASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 AC109329.2-201ENST00000519658 482 ntBASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 AC090115.3-201ENST00000553218 849 ntBASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 AC136619.2-201ENST00000563361 631 ntBASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 AL138976.2-201ENST00000563989 694 ntBASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 AC023824.2-201ENST00000566185 400 ntBASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 VN1R80P-201ENST00000597126 338 ntBASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 AC092747.3-201ENST00000603769 301 ntBASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 APOOP1-201ENST00000604695 592 ntBASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 AL355073.2-201ENST00000612106 557 ntBASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 ATP5A1P2-202ENST00000616464 443 ntBASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 U4.5-201ENST00000617137 123 ntBASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 AL353743.1-202ENST00000431724 1695 ntBASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.1□□□□□ -1.91
HERPUD2Q9BSE4 AL035425.3-201ENST00000564206 4996 ntBASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 AC135776.4-201ENST00000624300 1904 ntBASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 RNU6-1010P-201ENST00000362757 107 ntBASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 Y_RNA.402-201ENST00000383972 102 ntBASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 SNORA48.5-201ENST00000391143 135 ntBASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 RPL19P1-201ENST00000411635 428 ntBASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 POLHP1-201ENST00000411806 470 ntBASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 SNORD56-201ENST00000413522 71 ntBASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 RPLP0P7-201ENST00000416050 667 ntBASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 MTCO1P20-201ENST00000425366 358 ntBASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 AC124916.1-201ENST00000444020 547 ntBASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 AL031274.1-201ENST00000450334 232 ntBASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 AC073901.1-201ENST00000462471 408 ntBASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 AC008885.1-201ENST00000514930 301 ntBASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 RNA5SP385-201ENST00000515947 110 ntBASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 AC027176.1-201ENST00000560204 514 ntBASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 MIR5571-201ENST00000577998 113 ntBASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 AC068790.6-201ENST00000602558 258 ntBASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 AC073410.2-201ENST00000603240 332 ntBASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 AC080078.2-201ENST00000603766 501 ntBASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 AC123912.5-201ENST00000605470 343 ntBASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 RNU6-85P-201ENST00000605989 107 ntBASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HERPUD2Q9BSE4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
HERPUD2Q9BSE4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 MIR22-201ENST00000362190 85 ntBASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 MIR422A-201ENST00000362286 90 ntBASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 RNU6-622P-201ENST00000384272 103 ntBASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 RNU1-57P-201ENST00000384491 166 ntBASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 AL138885.1-201ENST00000405921 675 ntBASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 RNA5SP274-201ENST00000410484 108 ntBASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 RNU6-1140P-201ENST00000410517 106 ntBASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 Y_RNA.619-201ENST00000410951 90 ntBASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 MTCO1P21-201ENST00000416634 589 ntBASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 AP001025.1-201ENST00000486139 332 ntBASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 AC140059.1-201ENST00000489238 361 ntBASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 CKS1BP2-201ENST00000497342 240 ntBASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 SNORA14.1-201ENST00000516113 141 ntBASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 AC109329.1-201ENST00000518744 317 ntBASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 AC109635.3-201ENST00000529536 185 ntBASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 AP002404.1-201ENST00000532005 451 ntBASIC3.08□□□□□ -1.92
HERPUD2Q9BSE4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms