Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.43□□□□□ -1.86
SMOQ99835 NDUFB9P3-201ENST00000521269 501 ntBASIC3.43□□□□□ -1.86
SMOQ99835 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.43□□□□□ -1.86
SMOQ99835 CYCSP39-201ENST00000565821 309 ntBASIC3.43□□□□□ -1.86
SMOQ99835 MIR2682-201ENST00000580305 110 ntBASIC3.43□□□□□ -1.86
SMOQ99835 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.43□□□□□ -1.86
SMOQ99835 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.43□□□□□ -1.86
SMOQ99835 AC116312.1-201ENST00000606841 314 ntBASIC3.43□□□□□ -1.86
SMOQ99835 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.43□□□□□ -1.86
SMOQ99835 U2.21-201ENST00000637295 81 ntBASIC3.43□□□□□ -1.86
SMOQ99835 U6.99-201ENST00000637524 83 ntBASIC3.43□□□□□ -1.86
SMOQ99835 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SMOQ99835 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SMOQ99835 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SMOQ99835 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SMOQ99835 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SMOQ99835 Y_RNA.2-201ENST00000362330 96 ntBASIC3.42□□□□□ -1.86
SMOQ99835 Z98749.2-208ENST00000381646 500 ntBASIC3.42□□□□□ -1.86
SMOQ99835 Y_RNA.463-201ENST00000384271 102 ntBASIC3.42□□□□□ -1.86
SMOQ99835 RNU6-55P-201ENST00000411092 107 ntBASIC3.42□□□□□ -1.86
SMOQ99835 AC243428.1-201ENST00000421099 264 ntBASIC3.42□□□□□ -1.86
SMOQ99835 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.42□□□□□ -1.86
SMOQ99835 HMGB1P12-201ENST00000438594 598 ntBASIC3.42□□□□□ -1.86
SMOQ99835 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.42□□□□□ -1.86
SMOQ99835 RNU6-976P-201ENST00000516086 111 ntBASIC3.42□□□□□ -1.86
SMOQ99835 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.42□□□□□ -1.86
SMOQ99835 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.42□□□□□ -1.86
SMOQ99835 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.42□□□□□ -1.86
SMOQ99835 AC109446.1-201ENST00000566172 220 ntBASIC3.42□□□□□ -1.86
SMOQ99835 AC006504.6-201ENST00000590142 199 ntBASIC3.42□□□□□ -1.86
SMOQ99835 AC008121.1-201ENST00000603244 268 ntBASIC3.42□□□□□ -1.86
SMOQ99835 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.42□□□□□ -1.86
SMOQ99835 AC011890.2-201ENST00000613393 294 ntBASIC3.42□□□□□ -1.86
SMOQ99835 AL161629.2-201ENST00000615347 275 ntBASIC3.42□□□□□ -1.86
SMOQ99835 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.42□□□□□ -1.86
SMOQ99835 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
SMOQ99835 AC090740.1-201ENST00000623193 2262 ntBASIC3.41□□□□□ -1.86
SMOQ99835 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.41□□□□□ -1.86
SMOQ99835 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.41□□□□□ -1.86
SMOQ99835 Y_RNA.28-201ENST00000362554 111 ntBASIC3.41□□□□□ -1.86
SMOQ99835 RNU6-778P-201ENST00000363269 103 ntBASIC3.41□□□□□ -1.86
SMOQ99835 SNORA38.1-201ENST00000364172 131 ntBASIC3.41□□□□□ -1.86
SMOQ99835 RNU6-827P-201ENST00000365553 106 ntBASIC3.41□□□□□ -1.86
SMOQ99835 RNU6-1160P-201ENST00000384546 104 ntBASIC3.41□□□□□ -1.86
SMOQ99835 AL117339.3-201ENST00000418733 162 ntBASIC3.41□□□□□ -1.86
SMOQ99835 AC018865.2-201ENST00000423631 129 ntBASIC3.41□□□□□ -1.86
SMOQ99835 TOMM20P4-201ENST00000427861 435 ntBASIC3.41□□□□□ -1.86
SMOQ99835 AL353705.1-201ENST00000433468 480 ntBASIC3.41□□□□□ -1.86
SMOQ99835 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.41□□□□□ -1.86
SMOQ99835 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.41□□□□□ -1.86
SMOQ99835 RNU6-1045P-201ENST00000516321 107 ntBASIC3.41□□□□□ -1.86
SMOQ99835 RNU1-103P-201ENST00000516502 125 ntBASIC3.41□□□□□ -1.86
SMOQ99835 Y_RNA.687-201ENST00000516558 91 ntBASIC3.41□□□□□ -1.86
SMOQ99835 RNU6-1183P-201ENST00000517054 60 ntBASIC3.41□□□□□ -1.86
SMOQ99835 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.41□□□□□ -1.86
SMOQ99835 SYF2P1-201ENST00000550658 413 ntBASIC3.41□□□□□ -1.86
SMOQ99835 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.41□□□□□ -1.86
SMOQ99835 MIR3976-201ENST00000606807 139 ntBASIC3.41□□□□□ -1.86
SMOQ99835 AL591516.1-201ENST00000611326 274 ntBASIC3.41□□□□□ -1.86
SMOQ99835 PLCE1P1-201ENST00000622094 305 ntBASIC3.41□□□□□ -1.86
SMOQ99835 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.41□□□□□ -1.86
SMOQ99835 ZNF807-201ENST00000328088 1707 ntBASIC3.41□□□□□ -1.86
SMOQ99835 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.41□□□□□ -1.86
SMOQ99835 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
SMOQ99835 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
SMOQ99835 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.4□□□□□ -1.86
SMOQ99835 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
SMOQ99835 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
SMOQ99835 Y_RNA.148-201ENST00000363557 117 ntBASIC3.4□□□□□ -1.87
SMOQ99835 RNU6-1317P-201ENST00000364582 104 ntBASIC3.4□□□□□ -1.87
SMOQ99835 RNU6-790P-201ENST00000384479 105 ntBASIC3.4□□□□□ -1.87
SMOQ99835 RNU6-658P-201ENST00000384606 106 ntBASIC3.4□□□□□ -1.87
SMOQ99835 MIR34A-201ENST00000385130 110 ntBASIC3.4□□□□□ -1.87
SMOQ99835 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.4□□□□□ -1.87
SMOQ99835 RHEBP3-201ENST00000411920 351 ntBASIC3.4□□□□□ -1.87
SMOQ99835 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.4□□□□□ -1.87
SMOQ99835 AC006028.1-201ENST00000438379 402 ntBASIC3.4□□□□□ -1.87
SMOQ99835 AL035666.1-201ENST00000446195 348 ntBASIC3.4□□□□□ -1.87
SMOQ99835 AC115115.1-201ENST00000449927 248 ntBASIC3.4□□□□□ -1.87
SMOQ99835 RNA5SP310-201ENST00000459084 116 ntBASIC3.4□□□□□ -1.87
SMOQ99835 RNU6-1037P-201ENST00000459571 107 ntBASIC3.4□□□□□ -1.87
SMOQ99835 AC008571.1-201ENST00000467232 300 ntBASIC3.4□□□□□ -1.87
SMOQ99835 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.4□□□□□ -1.87
SMOQ99835 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.4□□□□□ -1.87
SMOQ99835 RNU6-928P-201ENST00000516876 104 ntBASIC3.4□□□□□ -1.87
SMOQ99835 RN7SKP57-201ENST00000517248 293 ntBASIC3.4□□□□□ -1.87
SMOQ99835 RN7SKP295-201ENST00000517264 153 ntBASIC3.4□□□□□ -1.87
SMOQ99835 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.4□□□□□ -1.87
SMOQ99835 AC011602.1-201ENST00000546484 331 ntBASIC3.4□□□□□ -1.87
SMOQ99835 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.4□□□□□ -1.87
SMOQ99835 MIR4782-201ENST00000577987 79 ntBASIC3.4□□□□□ -1.87
SMOQ99835 MIR5004-201ENST00000579078 107 ntBASIC3.4□□□□□ -1.87
SMOQ99835 CPDP1-201ENST00000579660 283 ntBASIC3.4□□□□□ -1.87
SMOQ99835 MIR3200-201ENST00000580767 85 ntBASIC3.4□□□□□ -1.87
SMOQ99835 MIR4298-201ENST00000584380 73 ntBASIC3.4□□□□□ -1.87
SMOQ99835 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SMOQ99835 AC009314.1-201ENST00000603871 304 ntBASIC3.4□□□□□ -1.87
SMOQ99835 AP000787.2-201ENST00000604432 568 ntBASIC3.4□□□□□ -1.87
SMOQ99835 AL355802.3-201ENST00000607571 545 ntBASIC3.4□□□□□ -1.87
SMOQ99835 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms