Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 MIR412-201ENST00000362142 91 ntBASIC3.26□□□□□ -1.89
TIMP4Q99727 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TIMP4Q99727 MIR607-201ENST00000385241 96 ntBASIC3.26□□□□□ -1.89
TIMP4Q99727 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
TIMP4Q99727 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TIMP4Q99727 AL159169.1-201ENST00000421119 127 ntBASIC3.26□□□□□ -1.89
TIMP4Q99727 RPL27AP8-201ENST00000424277 446 ntBASIC3.26□□□□□ -1.89
TIMP4Q99727 AC006989.1-201ENST00000427212 131 ntBASIC3.26□□□□□ -1.89
TIMP4Q99727 TOMM20P4-201ENST00000427861 435 ntBASIC3.26□□□□□ -1.89
TIMP4Q99727 CYCSP4-201ENST00000429682 331 ntBASIC3.26□□□□□ -1.89
TIMP4Q99727 AC092423.1-201ENST00000430165 186 ntBASIC3.26□□□□□ -1.89
TIMP4Q99727 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.26□□□□□ -1.89
TIMP4Q99727 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.26□□□□□ -1.89
TIMP4Q99727 MTCO3P8-201ENST00000453691 755 ntBASIC3.26□□□□□ -1.89
TIMP4Q99727 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.26□□□□□ -1.89
TIMP4Q99727 snoU13.4-201ENST00000458916 104 ntBASIC3.26□□□□□ -1.89
TIMP4Q99727 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.26□□□□□ -1.89
TIMP4Q99727 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.26□□□□□ -1.89
TIMP4Q99727 AC104564.1-201ENST00000493028 407 ntBASIC3.26□□□□□ -1.89
TIMP4Q99727 AC139453.3-201ENST00000493276 369 ntBASIC3.26□□□□□ -1.89
TIMP4Q99727 HMGB1P22-201ENST00000505315 124 ntBASIC3.26□□□□□ -1.89
TIMP4Q99727 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TIMP4Q99727 NDUFB9P3-201ENST00000521269 501 ntBASIC3.26□□□□□ -1.89
TIMP4Q99727 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.26□□□□□ -1.89
TIMP4Q99727 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.26□□□□□ -1.89
TIMP4Q99727 CPDP1-201ENST00000579660 283 ntBASIC3.26□□□□□ -1.89
TIMP4Q99727 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.26□□□□□ -1.89
TIMP4Q99727 AC016727.2-201ENST00000603988 621 ntBASIC3.26□□□□□ -1.89
TIMP4Q99727 Z98751.3-201ENST00000604447 521 ntBASIC3.26□□□□□ -1.89
TIMP4Q99727 AP002826.1-201ENST00000608835 315 ntBASIC3.26□□□□□ -1.89
TIMP4Q99727 AC062037.2-201ENST00000610137 73 ntBASIC3.26□□□□□ -1.89
TIMP4Q99727 HMGB1P24-202ENST00000615653 685 ntBASIC3.26□□□□□ -1.89
TIMP4Q99727 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.26□□□□□ -1.89
TIMP4Q99727 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
TIMP4Q99727 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TIMP4Q99727 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TIMP4Q99727 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
TIMP4Q99727 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TIMP4Q99727 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TIMP4Q99727 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.25□□□□□ -1.89
TIMP4Q99727 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.25□□□□□ -1.89
TIMP4Q99727 SNORD46.1-201ENST00000364139 104 ntBASIC3.25□□□□□ -1.89
TIMP4Q99727 Y_RNA.222-201ENST00000364264 102 ntBASIC3.25□□□□□ -1.89
TIMP4Q99727 SNORA7.2-201ENST00000364446 145 ntBASIC3.25□□□□□ -1.89
TIMP4Q99727 U8.8-201ENST00000365399 135 ntBASIC3.25□□□□□ -1.89
TIMP4Q99727 SNORA70.4-201ENST00000365509 134 ntBASIC3.25□□□□□ -1.89
TIMP4Q99727 RNU6-1181P-201ENST00000384191 106 ntBASIC3.25□□□□□ -1.89
TIMP4Q99727 RNU6-713P-201ENST00000384761 107 ntBASIC3.25□□□□□ -1.89
TIMP4Q99727 MIR183-201ENST00000384958 110 ntBASIC3.25□□□□□ -1.89
TIMP4Q99727 MIR625-201ENST00000385047 85 ntBASIC3.25□□□□□ -1.89
TIMP4Q99727 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TIMP4Q99727 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.25□□□□□ -1.89
TIMP4Q99727 U3.42-201ENST00000408746 214 ntBASIC3.25□□□□□ -1.89
TIMP4Q99727 SNORD56-201ENST00000413522 71 ntBASIC3.25□□□□□ -1.89
TIMP4Q99727 Z85995.1-201ENST00000415547 335 ntBASIC3.25□□□□□ -1.89
TIMP4Q99727 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.25□□□□□ -1.89
TIMP4Q99727 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.25□□□□□ -1.89
TIMP4Q99727 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.25□□□□□ -1.89
TIMP4Q99727 AC092573.2-201ENST00000434546 243 ntBASIC3.25□□□□□ -1.89
TIMP4Q99727 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.25□□□□□ -1.89
TIMP4Q99727 PIGFP3-201ENST00000441918 722 ntBASIC3.25□□□□□ -1.89
TIMP4Q99727 FABP5P15-201ENST00000453566 214 ntBASIC3.25□□□□□ -1.89
TIMP4Q99727 RPL23AP62-201ENST00000463396 453 ntBASIC3.25□□□□□ -1.89
TIMP4Q99727 RPL7P47-201ENST00000497299 556 ntBASIC3.25□□□□□ -1.89
TIMP4Q99727 RNU7-4P-201ENST00000516961 62 ntBASIC3.25□□□□□ -1.89
TIMP4Q99727 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TIMP4Q99727 AC004024.1-201ENST00000549244 247 ntBASIC3.25□□□□□ -1.89
TIMP4Q99727 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.25□□□□□ -1.89
TIMP4Q99727 AC103996.1-201ENST00000555468 102 ntBASIC3.25□□□□□ -1.89
TIMP4Q99727 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.25□□□□□ -1.89
TIMP4Q99727 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.25□□□□□ -1.89
TIMP4Q99727 AC078899.3-201ENST00000599065 212 ntBASIC3.25□□□□□ -1.89
TIMP4Q99727 AC009314.1-201ENST00000603871 304 ntBASIC3.25□□□□□ -1.89
TIMP4Q99727 AC011373.1-201ENST00000607270 237 ntBASIC3.25□□□□□ -1.89
TIMP4Q99727 AC107871.2-201ENST00000612894 502 ntBASIC3.25□□□□□ -1.89
TIMP4Q99727 AL355810.1-201ENST00000614629 552 ntBASIC3.25□□□□□ -1.89
TIMP4Q99727 AC048347.1-201ENST00000624621 427 ntBASIC3.25□□□□□ -1.89
TIMP4Q99727 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.25□□□□□ -1.89
TIMP4Q99727 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.25□□□□□ -1.89
TIMP4Q99727 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TIMP4Q99727 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TIMP4Q99727 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.24□□□□□ -1.89
TIMP4Q99727 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TIMP4Q99727 AP001148.1-201ENST00000624124 2359 ntBASIC3.24□□□□□ -1.89
TIMP4Q99727 MIR30E-201ENST00000362104 92 ntBASIC3.24□□□□□ -1.89
TIMP4Q99727 MIR208A-201ENST00000362287 71 ntBASIC3.24□□□□□ -1.89
TIMP4Q99727 AP002088.1-201ENST00000382740 395 ntBASIC3.24□□□□□ -1.89
TIMP4Q99727 MIR10A-201ENST00000385043 110 ntBASIC3.24□□□□□ -1.89
TIMP4Q99727 Y_RNA.623-201ENST00000411128 95 ntBASIC3.24□□□□□ -1.89
TIMP4Q99727 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.24□□□□□ -1.89
TIMP4Q99727 AC007560.1-201ENST00000426912 237 ntBASIC3.24□□□□□ -1.89
TIMP4Q99727 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.24□□□□□ -1.89
TIMP4Q99727 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.24□□□□□ -1.89
TIMP4Q99727 Z98949.2-201ENST00000440996 144 ntBASIC3.24□□□□□ -1.89
TIMP4Q99727 CYCSP35-201ENST00000451978 304 ntBASIC3.24□□□□□ -1.89
TIMP4Q99727 PRSS3P4-201ENST00000453323 162 ntBASIC3.24□□□□□ -1.89
TIMP4Q99727 RPS20P22-201ENST00000473700 357 ntBASIC3.24□□□□□ -1.89
TIMP4Q99727 RPL23AP45-201ENST00000476406 468 ntBASIC3.24□□□□□ -1.89
TIMP4Q99727 KC877373.1-201ENST00000479066 408 ntBASIC3.24□□□□□ -1.89
TIMP4Q99727 Y_RNA.668-201ENST00000516233 93 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms