Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 RNU11-3P-201ENST00000391111 133 ntBASIC1.45□□□□□ -2.18
VAT1Q99536 EIF4EP2-201ENST00000422816 654 ntBASIC1.45□□□□□ -2.18
VAT1Q99536 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.45□□□□□ -2.18
VAT1Q99536 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.45□□□□□ -2.18
VAT1Q99536 HMGB1P18-201ENST00000438801 619 ntBASIC1.45□□□□□ -2.18
VAT1Q99536 SNRPGP13-201ENST00000442212 177 ntBASIC1.45□□□□□ -2.18
VAT1Q99536 AL031313.1-201ENST00000448435 256 ntBASIC1.45□□□□□ -2.18
VAT1Q99536 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
VAT1Q99536 AC027575.1-201ENST00000481064 460 ntBASIC1.45□□□□□ -2.18
VAT1Q99536 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.45□□□□□ -2.18
VAT1Q99536 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.45□□□□□ -2.18
VAT1Q99536 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.45□□□□□ -2.18
VAT1Q99536 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.45□□□□□ -2.18
VAT1Q99536 CR383656.8-201ENST00000549046 145 ntBASIC1.45□□□□□ -2.18
VAT1Q99536 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.45□□□□□ -2.18
VAT1Q99536 AC012360.2-201ENST00000609349 391 ntBASIC1.45□□□□□ -2.18
VAT1Q99536 Z82243.1-201ENST00000609432 473 ntBASIC1.45□□□□□ -2.18
VAT1Q99536 AC004908.3-201ENST00000610248 625 ntBASIC1.45□□□□□ -2.18
VAT1Q99536 AC006338.1-201ENST00000618453 749 ntBASIC1.45□□□□□ -2.18
VAT1Q99536 AC009269.6-201ENST00000621778 588 ntBASIC1.45□□□□□ -2.18
VAT1Q99536 AL049777.1-201ENST00000622740 518 ntBASIC1.45□□□□□ -2.18
VAT1Q99536 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.45□□□□□ -2.18
VAT1Q99536 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.45□□□□□ -2.18
VAT1Q99536 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
VAT1Q99536 RNU6-487P-201ENST00000365430 104 ntBASIC1.44□□□□□ -2.18
VAT1Q99536 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
VAT1Q99536 RNU6-546P-201ENST00000383991 107 ntBASIC1.44□□□□□ -2.18
VAT1Q99536 RNU6-190P-201ENST00000384154 102 ntBASIC1.44□□□□□ -2.18
VAT1Q99536 RNU6-622P-201ENST00000384272 103 ntBASIC1.44□□□□□ -2.18
VAT1Q99536 RPS20P2-201ENST00000402520 389 ntBASIC1.44□□□□□ -2.18
VAT1Q99536 RN7SKP284-201ENST00000411002 343 ntBASIC1.44□□□□□ -2.18
VAT1Q99536 Y_RNA.623-201ENST00000411128 95 ntBASIC1.44□□□□□ -2.18
VAT1Q99536 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VAT1Q99536 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.44□□□□□ -2.18
VAT1Q99536 AL591806.2-201ENST00000433122 173 ntBASIC1.44□□□□□ -2.18
VAT1Q99536 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.44□□□□□ -2.18
VAT1Q99536 MTCO3P5-201ENST00000433620 714 ntBASIC1.44□□□□□ -2.18
VAT1Q99536 AC012308.1-201ENST00000451232 178 ntBASIC1.44□□□□□ -2.18
VAT1Q99536 HMGN2P23-201ENST00000456759 269 ntBASIC1.44□□□□□ -2.18
VAT1Q99536 AP001025.1-201ENST00000486139 332 ntBASIC1.44□□□□□ -2.18
VAT1Q99536 HMGB1P30-201ENST00000492455 606 ntBASIC1.44□□□□□ -2.18
VAT1Q99536 PTP4A1P4-201ENST00000512479 322 ntBASIC1.44□□□□□ -2.18
VAT1Q99536 AP005597.4-201ENST00000526762 229 ntBASIC1.44□□□□□ -2.18
VAT1Q99536 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.44□□□□□ -2.18
VAT1Q99536 AC015720.1-201ENST00000565251 277 ntBASIC1.44□□□□□ -2.18
VAT1Q99536 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.44□□□□□ -2.18
VAT1Q99536 AL645939.4-201ENST00000604495 135 ntBASIC1.44□□□□□ -2.18
VAT1Q99536 AC013244.3-201ENST00000605614 388 ntBASIC1.44□□□□□ -2.18
VAT1Q99536 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.44□□□□□ -2.18
VAT1Q99536 AC024940.5-201ENST00000622889 474 ntBASIC1.44□□□□□ -2.18
VAT1Q99536 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.44□□□□□ -2.18
VAT1Q99536 MTND5P10-201ENST00000603719 1809 ntBASIC1.44□□□□□ -2.18
VAT1Q99536 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VAT1Q99536 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.44□□□□□ -2.18
VAT1Q99536 FARSBP1-201ENST00000435808 1778 ntBASIC1.44□□□□□ -2.18
VAT1Q99536 HAUS6P2-201ENST00000433254 2404 ntBASIC1.44□□□□□ -2.18
VAT1Q99536 Y_RNA.40-201ENST00000362645 93 ntBASIC1.43□□□□□ -2.18
VAT1Q99536 SNORD3E-201ENST00000362899 217 ntBASIC1.43□□□□□ -2.18
VAT1Q99536 RNU6-1164P-201ENST00000364428 107 ntBASIC1.43□□□□□ -2.18
VAT1Q99536 RNY4P16-201ENST00000364768 94 ntBASIC1.43□□□□□ -2.18
VAT1Q99536 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
VAT1Q99536 RNU6-636P-201ENST00000384598 107 ntBASIC1.43□□□□□ -2.18
VAT1Q99536 MIR597-201ENST00000384968 97 ntBASIC1.43□□□□□ -2.18
VAT1Q99536 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.43□□□□□ -2.18
VAT1Q99536 UBE2V1P4-201ENST00000425374 344 ntBASIC1.43□□□□□ -2.18
VAT1Q99536 AL008629.1-201ENST00000438615 184 ntBASIC1.43□□□□□ -2.18
VAT1Q99536 RNA5SP57-201ENST00000459463 123 ntBASIC1.43□□□□□ -2.18
VAT1Q99536 snoU109.3-201ENST00000459477 145 ntBASIC1.43□□□□□ -2.18
VAT1Q99536 AL121594.1-201ENST00000475906 575 ntBASIC1.43□□□□□ -2.18
VAT1Q99536 RNU6-1003P-201ENST00000517099 105 ntBASIC1.43□□□□□ -2.18
VAT1Q99536 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.43□□□□□ -2.18
VAT1Q99536 AC105185.1-201ENST00000518705 535 ntBASIC1.43□□□□□ -2.18
VAT1Q99536 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.43□□□□□ -2.18
VAT1Q99536 AC107934.1-201ENST00000522215 217 ntBASIC1.43□□□□□ -2.18
VAT1Q99536 AP005660.1-201ENST00000522972 293 ntBASIC1.43□□□□□ -2.18
VAT1Q99536 MTATP6P15-201ENST00000527233 835 ntBASIC1.43□□□□□ -2.18
VAT1Q99536 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
VAT1Q99536 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.43□□□□□ -2.18
VAT1Q99536 AL022154.1-201ENST00000604698 785 ntBASIC1.43□□□□□ -2.18
VAT1Q99536 AC144521.1-201ENST00000607148 956 ntBASIC1.43□□□□□ -2.18
VAT1Q99536 AL157392.4-201ENST00000609756 345 ntBASIC1.43□□□□□ -2.18
VAT1Q99536 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.43□□□□□ -2.18
VAT1Q99536 RNU6-655P-201ENST00000362858 107 ntBASIC1.42□□□□□ -2.18
VAT1Q99536 RNU6-944P-201ENST00000364023 107 ntBASIC1.42□□□□□ -2.18
VAT1Q99536 RNU6-72P-201ENST00000384285 79 ntBASIC1.42□□□□□ -2.18
VAT1Q99536 SNORD14D-201ENST00000384390 87 ntBASIC1.42□□□□□ -2.18
VAT1Q99536 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
VAT1Q99536 AL355143.1-201ENST00000407101 841 ntBASIC1.42□□□□□ -2.18
VAT1Q99536 RNA5SP501-201ENST00000410990 112 ntBASIC1.42□□□□□ -2.18
VAT1Q99536 VN1R36P-201ENST00000414936 291 ntBASIC1.42□□□□□ -2.18
VAT1Q99536 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.42□□□□□ -2.18
VAT1Q99536 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.42□□□□□ -2.18
VAT1Q99536 AL353777.1-201ENST00000425552 326 ntBASIC1.42□□□□□ -2.18
VAT1Q99536 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.42□□□□□ -2.18
VAT1Q99536 VN1R108P-201ENST00000431580 830 ntBASIC1.42□□□□□ -2.18
VAT1Q99536 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.42□□□□□ -2.18
VAT1Q99536 AC245102.2-201ENST00000448956 180 ntBASIC1.42□□□□□ -2.18
VAT1Q99536 MTATP6P14-201ENST00000455189 673 ntBASIC1.42□□□□□ -2.18
VAT1Q99536 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.42□□□□□ -2.18
VAT1Q99536 snoU13.23-201ENST00000458863 104 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms