Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 RN7SL863P-201ENST00000462370 296 ntBASIC1.22□□□□□ -2.21
HMCN1Q96RW7 RPL23AP65-201ENST00000475608 468 ntBASIC1.22□□□□□ -2.21
HMCN1Q96RW7 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC1.22□□□□□ -2.21
HMCN1Q96RW7 AK6P2-201ENST00000549020 471 ntBASIC1.22□□□□□ -2.21
HMCN1Q96RW7 AC015912.2-201ENST00000571053 181 ntBASIC1.22□□□□□ -2.21
HMCN1Q96RW7 MIR4498-201ENST00000577599 66 ntBASIC1.22□□□□□ -2.21
HMCN1Q96RW7 MIR4659A-201ENST00000580269 81 ntBASIC1.22□□□□□ -2.21
HMCN1Q96RW7 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC1.22□□□□□ -2.21
HMCN1Q96RW7 AP001486.3-201ENST00000615334 372 ntBASIC1.22□□□□□ -2.21
HMCN1Q96RW7 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HMCN1Q96RW7 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC1.22□□□□□ -2.21
HMCN1Q96RW7 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HMCN1Q96RW7 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC1.22□□□□□ -2.21
HMCN1Q96RW7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC1.22□□□□□ -2.21
HMCN1Q96RW7 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC1.22□□□□□ -2.21
HMCN1Q96RW7 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
HMCN1Q96RW7 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HMCN1Q96RW7 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HMCN1Q96RW7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HMCN1Q96RW7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HMCN1Q96RW7 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
HMCN1Q96RW7 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC1.22□□□□□ -2.21
HMCN1Q96RW7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HMCN1Q96RW7 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HMCN1Q96RW7 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.21
HMCN1Q96RW7 Y_RNA.187-201ENST00000363918 113 ntBASIC1.21□□□□□ -2.21
HMCN1Q96RW7 RNA5SP235-201ENST00000365411 114 ntBASIC1.21□□□□□ -2.21
HMCN1Q96RW7 SNORD116-18-201ENST00000383961 92 ntBASIC1.21□□□□□ -2.21
HMCN1Q96RW7 RNU6-129P-201ENST00000391022 107 ntBASIC1.21□□□□□ -2.21
HMCN1Q96RW7 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.21□□□□□ -2.21
HMCN1Q96RW7 RPS26P47-201ENST00000427219 348 ntBASIC1.21□□□□□ -2.21
HMCN1Q96RW7 VTI1BP4-201ENST00000427516 527 ntBASIC1.21□□□□□ -2.21
HMCN1Q96RW7 CALM2P2-201ENST00000428512 440 ntBASIC1.21□□□□□ -2.21
HMCN1Q96RW7 DYNLL1P7-201ENST00000429273 258 ntBASIC1.21□□□□□ -2.21
HMCN1Q96RW7 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.21□□□□□ -2.21
HMCN1Q96RW7 HMGN2P7-201ENST00000456186 273 ntBASIC1.21□□□□□ -2.21
HMCN1Q96RW7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.21□□□□□ -2.21
HMCN1Q96RW7 TMEM248P1-201ENST00000510579 951 ntBASIC1.21□□□□□ -2.21
HMCN1Q96RW7 Y_RNA.659-201ENST00000515994 113 ntBASIC1.21□□□□□ -2.21
HMCN1Q96RW7 SCARNA21.1-201ENST00000515996 128 ntBASIC1.21□□□□□ -2.21
HMCN1Q96RW7 RNU6-1219P-201ENST00000516143 112 ntBASIC1.21□□□□□ -2.21
HMCN1Q96RW7 AC007751.1-201ENST00000529260 376 ntBASIC1.21□□□□□ -2.21
HMCN1Q96RW7 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.21□□□□□ -2.21
HMCN1Q96RW7 AC108479.2-201ENST00000617314 601 ntBASIC1.21□□□□□ -2.21
HMCN1Q96RW7 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.21□□□□□ -2.21
HMCN1Q96RW7 AC018692.3-201ENST00000623929 123 ntBASIC1.21□□□□□ -2.21
HMCN1Q96RW7 AC000095.2-202ENST00000637415 154 ntBASIC1.21□□□□□ -2.21
HMCN1Q96RW7 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.21
HMCN1Q96RW7 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC1.21□□□□□ -2.22
HMCN1Q96RW7 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC1.21□□□□□ -2.22
HMCN1Q96RW7 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC1.21□□□□□ -2.22
HMCN1Q96RW7 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
HMCN1Q96RW7 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
HMCN1Q96RW7 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
HMCN1Q96RW7 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
HMCN1Q96RW7 MIRLET7F1-201ENST00000362202 87 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 Y_RNA.9-201ENST00000362354 101 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 RNA5SP307-201ENST00000362863 116 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 SNORD115-13-201ENST00000363358 82 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 SNORD113-7-201ENST00000363762 77 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 SNORD115-16-201ENST00000363887 82 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 SNORD115-1-201ENST00000364961 82 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 RNU6-619P-201ENST00000365146 108 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
HMCN1Q96RW7 MIR513B-201ENST00000385136 84 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 Y_RNA.580-201ENST00000391004 95 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 AL591806.2-201ENST00000433122 173 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 PPIAP17-201ENST00000438507 471 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 RPS12P2-201ENST00000439728 269 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 MIR2113-201ENST00000459007 91 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 RNU6-717P-201ENST00000459076 104 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 RNA5SP233-201ENST00000459153 113 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 RNU6-625P-201ENST00000459412 107 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 AC090096.1-201ENST00000489168 390 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 AC010469.2-201ENST00000496412 480 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 AC034159.1-201ENST00000513885 583 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.21□□□□□ -2.22
HMCN1Q96RW7 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC1.21□□□□□ -2.22
HMCN1Q96RW7 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC1.21□□□□□ -2.22
HMCN1Q96RW7 AC091167.4-201ENST00000605079 184 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 Z84480.1-201ENST00000605131 311 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 SNORD91B-202ENST00000608459 222 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
HMCN1Q96RW7 DOCK11P1-201ENST00000553480 5932 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
HMCN1Q96RW7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
HMCN1Q96RW7 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
HMCN1Q96RW7 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
HMCN1Q96RW7 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
HMCN1Q96RW7 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
HMCN1Q96RW7 AL360270.2-201ENST00000562952 5985 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 MIR424-201ENST00000362227 98 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 RNU6-222P-201ENST00000362438 107 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 Y_RNA.48-201ENST00000362710 103 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 SNORD115-39-201ENST00000363694 82 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 MIR539-201ENST00000365690 78 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 RNU6-975P-201ENST00000384296 105 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 RNU6-434P-201ENST00000384376 107 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 Y_RNA.532-201ENST00000384590 113 ntBASIC1.21□□□□□ -2.22
HMCN1Q96RW7 Y_RNA.541-201ENST00000384640 113 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms