Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 RNU1-107P-201ENST00000516617 154 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 RNU6-405P-201ENST00000516637 110 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 PSMA3P-201ENST00000555485 635 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 MTCYBP33-201ENST00000575007 1130 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 MIR4703-201ENST00000577728 79 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 MIR4769-201ENST00000584126 77 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 AC073410.2-201ENST00000603240 332 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 AC007621.1-201ENST00000604544 437 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 AC024581.2-201ENST00000619986 252 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 AC010338.1-201ENST00000621823 717 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 AC092447.7-201ENST00000422212 1621 ntBASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SNRNP40Q96DI7 AP006437.1-201ENST00000641440 3685 ntBASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 HAUS6P2-201ENST00000433254 2404 ntBASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 RNA5SP289-201ENST00000362332 137 ntBASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 RNU6-942P-201ENST00000363002 107 ntBASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 Y_RNA.194-201ENST00000363985 102 ntBASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 RNA5SP240-201ENST00000365355 128 ntBASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 MIR181A2-201ENST00000384863 110 ntBASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 Y_RNA.582-201ENST00000391023 95 ntBASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 AC016907.1-201ENST00000419483 435 ntBASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 VN1R108P-201ENST00000431580 830 ntBASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 AC133134.1-201ENST00000466800 359 ntBASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 RPS29P21-201ENST00000496272 170 ntBASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 MTCO3P7-201ENST00000510008 774 ntBASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 AP005902.1-201ENST00000521358 186 ntBASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 CR383656.8-201ENST00000549046 145 ntBASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 AC073539.2-201ENST00000597113 165 ntBASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 AL355297.2-201ENST00000604792 129 ntBASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 AL138963.2-201ENST00000605137 226 ntBASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 NDUFA8P1-201ENST00000605525 367 ntBASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 AC069234.5-201ENST00000611056 416 ntBASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 AL020991.1-201ENST00000612314 373 ntBASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 AL161431.1-201ENST00000618966 4205 ntBASIC2.37□□□□□ -2.03
SNRNP40Q96DI7 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 RNU5E-7P-201ENST00000365290 117 ntBASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 RNU5A-6P-201ENST00000384136 116 ntBASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 RNU6-1103P-201ENST00000384150 107 ntBASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 RNU2-16P-201ENST00000410712 136 ntBASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 RNU4-53P-201ENST00000410828 140 ntBASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 RN7SKP192-201ENST00000411291 327 ntBASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 RPLP0P7-201ENST00000416050 667 ntBASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 AL139109.1-201ENST00000455491 297 ntBASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 AC090515.1-201ENST00000465295 476 ntBASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 RPL23AP49-201ENST00000492925 468 ntBASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 LRRC34P2-201ENST00000514850 553 ntBASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 RNA5SP320-201ENST00000516263 124 ntBASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 SNORA43.2-201ENST00000516652 128 ntBASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 AC025449.1-201ENST00000603896 529 ntBASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 AC064807.4-201ENST00000607201 407 ntBASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 AL031601.2-202ENST00000622650 282 ntBASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
SNRNP40Q96DI7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 ZNF680P1-201ENST00000436625 1469 ntBASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 RNU1-57P-201ENST00000384491 166 ntBASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 MIR27B-201ENST00000385129 97 ntBASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 RN7SKP158-201ENST00000410453 326 ntBASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 RNU6-607P-201ENST00000411283 108 ntBASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 AC003685.2-201ENST00000422795 395 ntBASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 DYNLL1P5-201ENST00000467158 270 ntBASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 AP000852.1-201ENST00000472460 573 ntBASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 MTND2P33-201ENST00000506452 1031 ntBASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 AF213884.2-201ENST00000510417 903 ntBASIC2.35□□□□□ -2.03
SNRNP40Q96DI7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms