Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.98□□□□□ -1.61
HLA-CQ95604 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
HLA-CQ95604 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-CQ95604 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.98□□□□□ -1.61
HLA-CQ95604 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-CQ95604 AC110774.1-201ENST00000623567 2018 ntBASIC4.97□□□□□ -1.61
HLA-CQ95604 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-CQ95604 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-CQ95604 MIR208A-201ENST00000362287 71 ntBASIC4.97□□□□□ -1.61
HLA-CQ95604 RNA5SP453-201ENST00000362503 119 ntBASIC4.97□□□□□ -1.61
HLA-CQ95604 Y_RNA.293-201ENST00000364908 93 ntBASIC4.97□□□□□ -1.61
HLA-CQ95604 Y_RNA.333-201ENST00000365274 102 ntBASIC4.97□□□□□ -1.61
HLA-CQ95604 SNORD37.2-201ENST00000391075 66 ntBASIC4.97□□□□□ -1.61
HLA-CQ95604 U3.26-201ENST00000391236 204 ntBASIC4.97□□□□□ -1.61
HLA-CQ95604 PTMAP5-201ENST00000393073 333 ntBASIC4.97□□□□□ -1.61
HLA-CQ95604 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-CQ95604 AL590399.2-201ENST00000427536 309 ntBASIC4.97□□□□□ -1.61
HLA-CQ95604 RPL7AP49-201ENST00000429522 581 ntBASIC4.97□□□□□ -1.61
HLA-CQ95604 AL591438.1-201ENST00000433508 581 ntBASIC4.97□□□□□ -1.61
HLA-CQ95604 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-CQ95604 RNU6-1073P-201ENST00000517182 106 ntBASIC4.97□□□□□ -1.61
HLA-CQ95604 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-CQ95604 AP003730.1-201ENST00000524605 285 ntBASIC4.97□□□□□ -1.61
HLA-CQ95604 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.97□□□□□ -1.61
HLA-CQ95604 AC090877.1-201ENST00000561418 344 ntBASIC4.97□□□□□ -1.61
HLA-CQ95604 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-CQ95604 RN7SL176P-201ENST00000580352 264 ntBASIC4.97□□□□□ -1.61
HLA-CQ95604 MIR3944-201ENST00000581277 108 ntBASIC4.97□□□□□ -1.61
HLA-CQ95604 U7.2-201ENST00000607576 63 ntBASIC4.97□□□□□ -1.61
HLA-CQ95604 AL022401.1-201ENST00000619498 108 ntBASIC4.97□□□□□ -1.61
HLA-CQ95604 MIR6839-201ENST00000620425 113 ntBASIC4.97□□□□□ -1.61
HLA-CQ95604 AC112200.1-201ENST00000625015 234 ntBASIC4.97□□□□□ -1.61
HLA-CQ95604 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-CQ95604 OR14L1P-202ENST00000641545 3009 ntBASIC4.97□□□□□ -1.61
HLA-CQ95604 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.96□□□□□ -1.61
HLA-CQ95604 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
HLA-CQ95604 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-CQ95604 AC068254.2-201ENST00000623938 3577 ntBASIC4.96□□□□□ -1.62
HLA-CQ95604 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-CQ95604 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
HLA-CQ95604 SPRR2C-201ENST00000290702 219 ntBASIC4.96□□□□□ -1.62
HLA-CQ95604 RNU6-884P-201ENST00000363889 107 ntBASIC4.96□□□□□ -1.62
HLA-CQ95604 Y_RNA.368-201ENST00000365547 113 ntBASIC4.96□□□□□ -1.62
HLA-CQ95604 RNU6-643P-201ENST00000384018 107 ntBASIC4.96□□□□□ -1.62
HLA-CQ95604 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-CQ95604 HMGN2P10-201ENST00000448085 265 ntBASIC4.96□□□□□ -1.62
HLA-CQ95604 AC090525.1-201ENST00000479116 478 ntBASIC4.96□□□□□ -1.62
HLA-CQ95604 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-CQ95604 RNU1-45P-201ENST00000517191 141 ntBASIC4.96□□□□□ -1.62
HLA-CQ95604 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-CQ95604 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.96□□□□□ -1.62
HLA-CQ95604 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-CQ95604 AC025946.2-201ENST00000603398 234 ntBASIC4.96□□□□□ -1.62
HLA-CQ95604 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-CQ95604 AL136964.1-201ENST00000622038 2990 ntBASIC4.96□□□□□ -1.62
HLA-CQ95604 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-CQ95604 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-CQ95604 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-CQ95604 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-CQ95604 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-CQ95604 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
HLA-CQ95604 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-CQ95604 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-CQ95604 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HLA-CQ95604 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
HLA-CQ95604 AC007656.2-201ENST00000624902 4547 ntBASIC4.95□□□□□ -1.62
HLA-CQ95604 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-CQ95604 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-CQ95604 SNORD115-30-201ENST00000364117 82 ntBASIC4.95□□□□□ -1.62
HLA-CQ95604 RNU1-82P-201ENST00000390851 165 ntBASIC4.95□□□□□ -1.62
HLA-CQ95604 PTMAP2-201ENST00000397627 327 ntBASIC4.95□□□□□ -1.62
HLA-CQ95604 RPS27AP10-201ENST00000496103 208 ntBASIC4.95□□□□□ -1.62
HLA-CQ95604 PARP4P3-201ENST00000510265 317 ntBASIC4.95□□□□□ -1.62
HLA-CQ95604 RNU6-344P-201ENST00000516635 111 ntBASIC4.95□□□□□ -1.62
HLA-CQ95604 SCARNA13-201ENST00000516672 275 ntBASIC4.95□□□□□ -1.62
HLA-CQ95604 SNORA31.16-201ENST00000516773 139 ntBASIC4.95□□□□□ -1.62
HLA-CQ95604 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-CQ95604 AC027176.1-201ENST00000560204 514 ntBASIC4.95□□□□□ -1.62
HLA-CQ95604 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-CQ95604 AL021997.2-201ENST00000615674 271 ntBASIC4.95□□□□□ -1.62
HLA-CQ95604 SNX18P1Y-201ENST00000616231 511 ntBASIC4.95□□□□□ -1.62
HLA-CQ95604 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.95□□□□□ -1.62
HLA-CQ95604 MIR3653-201ENST00000625572 110 ntBASIC4.95□□□□□ -1.62
HLA-CQ95604 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-CQ95604 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
HLA-CQ95604 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
HLA-CQ95604 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-CQ95604 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HLA-CQ95604 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-CQ95604 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
HLA-CQ95604 ABCC13-202ENST00000463099 3842 ntBASIC4.95□□□□□ -1.62
HLA-CQ95604 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-CQ95604 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HLA-CQ95604 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-CQ95604 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-CQ95604 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
HLA-CQ95604 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-CQ95604 TLK1P1-201ENST00000456760 2440 ntBASIC4.94□□□□□ -1.62
HLA-CQ95604 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-CQ95604 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms