Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.14□□□□□ -1.75
BRF1Q92994 AC006130.2-201ENST00000586202 326 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.14□□□□□ -1.75
BRF1Q92994 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.14□□□□□ -1.75
BRF1Q92994 MIR1244-1-201ENST00000612829 85 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 AC039056.2-201ENST00000622261 511 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 AC027309.3-201ENST00000623419 351 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 MIR1244-3-201ENST00000635744 85 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 MIR1244-2-201ENST00000636449 85 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 MIR1244-4-202ENST00000636813 85 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 U4.7-201ENST00000638126 106 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
BRF1Q92994 ZNF72P-201ENST00000425869 1908 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.14□□□□□ -1.75
BRF1Q92994 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
BRF1Q92994 AC032011.1-201ENST00000611703 1549 ntBASIC4.14□□□□□ -1.75
BRF1Q92994 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
BRF1Q92994 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
BRF1Q92994 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
BRF1Q92994 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
BRF1Q92994 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
BRF1Q92994 Y_RNA.307-201ENST00000365022 117 ntBASIC4.13□□□□□ -1.75
BRF1Q92994 RNU6-472P-201ENST00000384299 107 ntBASIC4.13□□□□□ -1.75
BRF1Q92994 RNU6-713P-201ENST00000384761 107 ntBASIC4.13□□□□□ -1.75
BRF1Q92994 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.13□□□□□ -1.75
BRF1Q92994 AL138878.1-201ENST00000405131 347 ntBASIC4.13□□□□□ -1.75
BRF1Q92994 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.13□□□□□ -1.75
BRF1Q92994 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
BRF1Q92994 AC007560.1-201ENST00000426912 237 ntBASIC4.13□□□□□ -1.75
BRF1Q92994 AC007389.2-201ENST00000434630 306 ntBASIC4.13□□□□□ -1.75
BRF1Q92994 SNRPEP9-201ENST00000436794 238 ntBASIC4.13□□□□□ -1.75
BRF1Q92994 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.13□□□□□ -1.75
BRF1Q92994 AL645939.1-201ENST00000453429 797 ntBASIC4.13□□□□□ -1.75
BRF1Q92994 RPS29P27-201ENST00000463711 170 ntBASIC4.13□□□□□ -1.75
BRF1Q92994 AC104564.1-201ENST00000493028 407 ntBASIC4.13□□□□□ -1.75
BRF1Q92994 RPL30P5-201ENST00000494923 336 ntBASIC4.13□□□□□ -1.75
BRF1Q92994 RN7SKP18-201ENST00000516005 275 ntBASIC4.13□□□□□ -1.75
BRF1Q92994 RNU6-1143P-201ENST00000516125 104 ntBASIC4.13□□□□□ -1.75
BRF1Q92994 RNU2-53P-201ENST00000516257 147 ntBASIC4.13□□□□□ -1.75
BRF1Q92994 RNU6-1282P-201ENST00000516735 96 ntBASIC4.13□□□□□ -1.75
BRF1Q92994 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.13□□□□□ -1.75
BRF1Q92994 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.13□□□□□ -1.75
BRF1Q92994 AC125232.2-201ENST00000592457 143 ntBASIC4.13□□□□□ -1.75
BRF1Q92994 MTND4LP5-201ENST00000605152 292 ntBASIC4.13□□□□□ -1.75
BRF1Q92994 RNVU1-4-201ENST00000612985 164 ntBASIC4.13□□□□□ -1.75
BRF1Q92994 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.13□□□□□ -1.75
BRF1Q92994 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
BRF1Q92994 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
BRF1Q92994 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.13□□□□□ -1.75
BRF1Q92994 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.13□□□□□ -1.75
BRF1Q92994 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
BRF1Q92994 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.12□□□□□ -1.75
BRF1Q92994 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
BRF1Q92994 AL359837.1-201ENST00000381357 287 ntBASIC4.12□□□□□ -1.75
BRF1Q92994 Y_RNA.489-201ENST00000384410 101 ntBASIC4.12□□□□□ -1.75
BRF1Q92994 MT-TR-201ENST00000387439 65 ntBASIC4.12□□□□□ -1.75
BRF1Q92994 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
BRF1Q92994 SNORA69.1-201ENST00000390904 137 ntBASIC4.12□□□□□ -1.75
BRF1Q92994 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
BRF1Q92994 RNU6ATAC-201ENST00000408749 126 ntBASIC4.12□□□□□ -1.75
BRF1Q92994 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.12□□□□□ -1.75
BRF1Q92994 OR2AQ1P-201ENST00000451972 200 ntBASIC4.12□□□□□ -1.75
BRF1Q92994 AC079354.2-201ENST00000453523 154 ntBASIC4.12□□□□□ -1.75
BRF1Q92994 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC4.12□□□□□ -1.75
BRF1Q92994 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.12□□□□□ -1.75
BRF1Q92994 SNORA25.11-201ENST00000515935 105 ntBASIC4.12□□□□□ -1.75
BRF1Q92994 RNU6-377P-201ENST00000515965 102 ntBASIC4.12□□□□□ -1.75
BRF1Q92994 RNU6-703P-201ENST00000516946 107 ntBASIC4.12□□□□□ -1.75
BRF1Q92994 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.12□□□□□ -1.75
BRF1Q92994 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.12□□□□□ -1.75
BRF1Q92994 AC109329.1-201ENST00000518744 317 ntBASIC4.12□□□□□ -1.75
BRF1Q92994 OR5D17P-201ENST00000531492 978 ntBASIC4.12□□□□□ -1.75
BRF1Q92994 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.12□□□□□ -1.75
BRF1Q92994 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.12□□□□□ -1.75
BRF1Q92994 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.12□□□□□ -1.75
BRF1Q92994 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.12□□□□□ -1.75
BRF1Q92994 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
BRF1Q92994 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
BRF1Q92994 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.12□□□□□ -1.75
BRF1Q92994 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
BRF1Q92994 AC022336.2-201ENST00000568966 2538 ntBASIC4.12□□□□□ -1.75
BRF1Q92994 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
BRF1Q92994 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
BRF1Q92994 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.11□□□□□ -1.75
BRF1Q92994 AC233263.6-201ENST00000631132 1963 ntBASIC4.11□□□□□ -1.75
BRF1Q92994 U3.6-201ENST00000363622 211 ntBASIC4.11□□□□□ -1.75
BRF1Q92994 Y_RNA.288-201ENST00000364854 92 ntBASIC4.11□□□□□ -1.75
BRF1Q92994 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
BRF1Q92994 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
BRF1Q92994 RNU6-1197P-201ENST00000391183 107 ntBASIC4.11□□□□□ -1.75
BRF1Q92994 MTCYBP2-201ENST00000407745 171 ntBASIC4.11□□□□□ -1.75
BRF1Q92994 RNU2-71P-201ENST00000411395 189 ntBASIC4.11□□□□□ -1.75
BRF1Q92994 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.11□□□□□ -1.75
BRF1Q92994 RPL17P36-201ENST00000420302 549 ntBASIC4.11□□□□□ -1.75
BRF1Q92994 ELOCP20-201ENST00000422460 345 ntBASIC4.11□□□□□ -1.75
BRF1Q92994 AC092423.1-201ENST00000430165 186 ntBASIC4.11□□□□□ -1.75
BRF1Q92994 USP9YP16-201ENST00000430287 407 ntBASIC4.11□□□□□ -1.75
BRF1Q92994 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
BRF1Q92994 USP9YP23-201ENST00000455085 407 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms