Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.87□□□□□ -1.95
SNED1Q8TER0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SNED1Q8TER0 Y_RNA.259-201ENST00000364619 101 ntBASIC2.86□□□□□ -1.95
SNED1Q8TER0 RNU4-48P-201ENST00000365559 182 ntBASIC2.86□□□□□ -1.95
SNED1Q8TER0 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.86□□□□□ -1.95
SNED1Q8TER0 Y_RNA.474-201ENST00000384341 102 ntBASIC2.86□□□□□ -1.95
SNED1Q8TER0 SNORA64-201ENST00000384674 134 ntBASIC2.86□□□□□ -1.95
SNED1Q8TER0 MIR559-201ENST00000385188 96 ntBASIC2.86□□□□□ -1.95
SNED1Q8TER0 SNORA75.4-201ENST00000391278 119 ntBASIC2.86□□□□□ -1.95
SNED1Q8TER0 AL136372.1-201ENST00000403060 228 ntBASIC2.86□□□□□ -1.95
SNED1Q8TER0 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.86□□□□□ -1.95
SNED1Q8TER0 RNU2-15P-201ENST00000410692 191 ntBASIC2.86□□□□□ -1.95
SNED1Q8TER0 RNU2-62P-201ENST00000410868 191 ntBASIC2.86□□□□□ -1.95
SNED1Q8TER0 TMEM167AP1-201ENST00000423409 219 ntBASIC2.86□□□□□ -1.95
SNED1Q8TER0 RPL27AP8-201ENST00000424277 446 ntBASIC2.86□□□□□ -1.95
SNED1Q8TER0 Z98742.2-201ENST00000431564 187 ntBASIC2.86□□□□□ -1.95
SNED1Q8TER0 OR4K11P-201ENST00000431829 904 ntBASIC2.86□□□□□ -1.95
SNED1Q8TER0 ERLEC1P1-201ENST00000433806 578 ntBASIC2.86□□□□□ -1.95
SNED1Q8TER0 AC073415.1-201ENST00000449240 153 ntBASIC2.86□□□□□ -1.95
SNED1Q8TER0 GMFBP1-201ENST00000467831 427 ntBASIC2.86□□□□□ -1.95
SNED1Q8TER0 AC104472.2-201ENST00000469035 601 ntBASIC2.86□□□□□ -1.95
SNED1Q8TER0 TRBV1-201ENST00000476502 284 ntBASIC2.86□□□□□ -1.95
SNED1Q8TER0 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SNED1Q8TER0 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.86□□□□□ -1.95
SNED1Q8TER0 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.86□□□□□ -1.95
SNED1Q8TER0 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.86□□□□□ -1.95
SNED1Q8TER0 AC093249.1-201ENST00000567049 203 ntBASIC2.86□□□□□ -1.95
SNED1Q8TER0 OR4K8P-201ENST00000578842 1048 ntBASIC2.86□□□□□ -1.95
SNED1Q8TER0 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.86□□□□□ -1.95
SNED1Q8TER0 GLUD1P4-201ENST00000590914 418 ntBASIC2.86□□□□□ -1.95
SNED1Q8TER0 RNU6-89P-201ENST00000606519 100 ntBASIC2.86□□□□□ -1.95
SNED1Q8TER0 AC134503.1-201ENST00000633048 54 ntBASIC2.86□□□□□ -1.95
SNED1Q8TER0 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.86□□□□□ -1.95
SNED1Q8TER0 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.86□□□□□ -1.95
SNED1Q8TER0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
SNED1Q8TER0 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.86□□□□□ -1.95
SNED1Q8TER0 AC009487.2-201ENST00000420969 6821 ntBASIC2.86□□□□□ -1.95
SNED1Q8TER0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.86□□□□□ -1.95
SNED1Q8TER0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.86□□□□□ -1.95
SNED1Q8TER0 AC073343.1-201ENST00000328239 651 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 Y_RNA.128-201ENST00000363391 112 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 Y_RNA.234-201ENST00000364409 97 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 Y_RNA.315-201ENST00000365117 102 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 RNU6-738P-201ENST00000384531 106 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 Y_RNA.579-201ENST00000390939 94 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 RNU6-278P-201ENST00000390945 109 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SNED1Q8TER0 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.85□□□□□ -1.95
SNED1Q8TER0 AC092447.6-201ENST00000414578 210 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 ATG3P1-201ENST00000419507 911 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 AL451054.2-201ENST00000420896 202 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.85□□□□□ -1.95
SNED1Q8TER0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.85□□□□□ -1.95
SNED1Q8TER0 AC104389.3-201ENST00000445629 235 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.85□□□□□ -1.95
SNED1Q8TER0 GAPDHP27-201ENST00000447427 1020 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 RNA5SP310-201ENST00000459084 116 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.85□□□□□ -1.95
SNED1Q8TER0 RNU6-1170P-201ENST00000515974 106 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 Y_RNA.691-201ENST00000516611 103 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.85□□□□□ -1.95
SNED1Q8TER0 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.85□□□□□ -1.95
SNED1Q8TER0 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.85□□□□□ -1.95
SNED1Q8TER0 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.85□□□□□ -1.95
SNED1Q8TER0 MIR3171-201ENST00000584270 74 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 UBE2L4-201ENST00000587688 464 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 AC006504.6-201ENST00000590142 199 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.85□□□□□ -1.95
SNED1Q8TER0 AP002826.1-201ENST00000608835 315 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.85□□□□□ -1.95
SNED1Q8TER0 uc_338.12-201ENST00000616344 181 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
SNED1Q8TER0 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SNED1Q8TER0 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SNED1Q8TER0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.85□□□□□ -1.95
SNED1Q8TER0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SNED1Q8TER0 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
SNED1Q8TER0 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.85□□□□□ -1.95
SNED1Q8TER0 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 Y_RNA.231-201ENST00000364358 102 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 SNORA14A-201ENST00000364773 135 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 RNU4-66P-201ENST00000365199 138 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 RNU6-39P-201ENST00000384344 107 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 RNU6-831P-201ENST00000384548 107 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 AC093151.1-201ENST00000427711 313 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.85□□□□□ -1.95
SNED1Q8TER0 AL590664.1-201ENST00000448065 339 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 SNORD19B-201ENST00000459623 84 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 HMGN2P26-201ENST00000463169 339 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.85□□□□□ -1.95
SNED1Q8TER0 RPL30P14-201ENST00000482744 348 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 AC021382.1-201ENST00000483523 359 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.85□□□□□ -1.95
SNED1Q8TER0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.85□□□□□ -1.95
SNED1Q8TER0 AC107222.1-201ENST00000510899 637 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 ELOCP31-201ENST00000540463 467 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.85□□□□□ -1.95
SNED1Q8TER0 DNAJC8P1-201ENST00000554535 372 ntBASIC2.85□□□□□ -1.95
SNED1Q8TER0 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.85□□□□□ -1.95
SNED1Q8TER0 MED28P6-201ENST00000558776 231 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 224 ms