Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AC108206.1-201ENST00000570186 4159 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
LINC01006Q8NI28 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.04□□□□□ -2.08
LINC01006Q8NI28 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
LINC01006Q8NI28 RNU1-105P-201ENST00000363470 161 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 SNORD14B-201ENST00000364533 90 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LINC01006Q8NI28 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.04□□□□□ -2.08
LINC01006Q8NI28 MIR27B-201ENST00000385129 97 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
LINC01006Q8NI28 RNA5SP219-201ENST00000390940 113 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 RNU6-332P-201ENST00000391193 108 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 AL512633.1-201ENST00000399931 655 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 RNU2-3P-201ENST00000410144 191 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 RN7SKP123-201ENST00000410732 291 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 RNU6-1148P-201ENST00000410992 104 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.04□□□□□ -2.08
LINC01006Q8NI28 CYCSP33-201ENST00000414485 327 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.04□□□□□ -2.08
LINC01006Q8NI28 SRIP2-201ENST00000428470 166 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 ERLEC1P1-201ENST00000433806 578 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 AL078601.1-201ENST00000444542 271 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 PRPS1P1-201ENST00000445305 876 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.04□□□□□ -2.08
LINC01006Q8NI28 HMGN2P26-201ENST00000463169 339 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 AC087884.1-201ENST00000469738 328 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.04□□□□□ -2.08
LINC01006Q8NI28 AC008549.1-201ENST00000512900 643 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.04□□□□□ -2.08
LINC01006Q8NI28 AC109329.2-201ENST00000519658 482 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.04□□□□□ -2.08
LINC01006Q8NI28 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.04□□□□□ -2.08
LINC01006Q8NI28 CENPUP1-201ENST00000526649 1202 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.04□□□□□ -2.08
LINC01006Q8NI28 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.04□□□□□ -2.08
LINC01006Q8NI28 OR11H5P-201ENST00000554039 926 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 AC060780.3-201ENST00000589464 80 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 AC092747.3-201ENST00000603769 301 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 AL645944.1-201ENST00000603857 493 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
LINC01006Q8NI28 U4.3-201ENST00000621047 82 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.04□□□□□ -2.08
LINC01006Q8NI28 AC022418.1-201ENST00000624118 445 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 AC090617.10-201ENST00000624308 134 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 AC110079.1-202ENST00000635213 138 ntBASIC2.04□□□□□ -2.08
LINC01006Q8NI28 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LINC01006Q8NI28 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.04□□□□□ -2.08
LINC01006Q8NI28 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.03□□□□□ -2.08
LINC01006Q8NI28 MTND5P19-201ENST00000424872 1794 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 MIR412-201ENST00000362142 91 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 U8.2-201ENST00000363156 134 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.03□□□□□ -2.08
LINC01006Q8NI28 Y_RNA.623-201ENST00000411128 95 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 POLHP1-201ENST00000411806 470 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 RPL26P27-201ENST00000414397 437 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 AL353621.1-201ENST00000418219 243 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.03□□□□□ -2.08
LINC01006Q8NI28 AC093151.1-201ENST00000427711 313 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 BRK1P2-201ENST00000442875 223 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.03□□□□□ -2.08
LINC01006Q8NI28 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.03□□□□□ -2.08
LINC01006Q8NI28 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.03□□□□□ -2.08
LINC01006Q8NI28 RNU6-1208P-201ENST00000459588 107 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 RPL23AP11-201ENST00000475260 469 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 AP004217.1-201ENST00000480579 346 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 AC083904.1-201ENST00000487828 231 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 AC116353.2-201ENST00000505332 712 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.03□□□□□ -2.08
LINC01006Q8NI28 ANXA2P1-201ENST00000505539 926 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.03□□□□□ -2.08
LINC01006Q8NI28 AC008716.1-201ENST00000511084 513 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.03□□□□□ -2.08
LINC01006Q8NI28 RN7SKP24-201ENST00000515888 284 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 RNA5SP320-201ENST00000516263 124 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 RNU6-358P-201ENST00000516564 75 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.03□□□□□ -2.08
LINC01006Q8NI28 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.03□□□□□ -2.08
LINC01006Q8NI28 AC243972.3-201ENST00000539655 198 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 AC090115.3-201ENST00000553218 849 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.03□□□□□ -2.08
LINC01006Q8NI28 MTCO3P23-201ENST00000561363 289 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 LRRC37A5P-203ENST00000580181 585 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 MIR5692A1-201ENST00000580523 69 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.03□□□□□ -2.08
LINC01006Q8NI28 BNIP3P25-201ENST00000596023 559 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 VN1R80P-201ENST00000597126 338 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 CTHRC1P1-201ENST00000605383 469 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 AC002044.1-201ENST00000606707 158 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
LINC01006Q8NI28 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.03□□□□□ -2.08
LINC01006Q8NI28 AC100810.6-201ENST00000638068 285 ntBASIC2.03□□□□□ -2.08
LINC01006Q8NI28 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
LINC01006Q8NI28 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
LINC01006Q8NI28 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.03□□□□□ -2.09
LINC01006Q8NI28 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
LINC01006Q8NI28 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms