Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 Z82188.1-201ENST00000436709 154 ntBASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 RPL23AP52-201ENST00000439311 478 ntBASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 RPS29P31-201ENST00000446147 164 ntBASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 AC006539.3-201ENST00000454258 129 ntBASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 RNU7-169P-201ENST00000459456 61 ntBASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 AC112771.1-201ENST00000463581 102 ntBASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 RN7SL319P-201ENST00000480656 221 ntBASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 AC006445.1-201ENST00000491925 405 ntBASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 AC093852.1-201ENST00000503587 266 ntBASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 MRPS36P2-201ENST00000512569 299 ntBASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 RNA5SP112-201ENST00000515937 99 ntBASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 RNU6-764P-201ENST00000516396 105 ntBASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 SCARNA11.3-201ENST00000517276 130 ntBASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 IGKV1-32-201ENST00000519290 311 ntBASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 AC008011.1-201ENST00000545989 227 ntBASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 AC010928.2-201ENST00000588017 287 ntBASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 AL137843.1-201ENST00000605078 385 ntBASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 AC099778.2-201ENST00000610904 211 ntBASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 MIR6729-201ENST00000618194 65 ntBASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 MIR6886-201ENST00000619864 61 ntBASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 AC138305.3-201ENST00000624988 240 ntBASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 SNORD98-201ENST00000636377 67 ntBASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 AL773545.4-201ENST00000637262 310 ntBASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 AL513478.4-201ENST00000641636 310 ntBASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.34□□□□□ -1.87
CLRN3Q8NCR9 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.88
CLRN3Q8NCR9 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CLRN3Q8NCR9 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
CLRN3Q8NCR9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CLRN3Q8NCR9 CEP170P1-201ENST00000502249 4587 ntBASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 RNA5SP305-201ENST00000362665 119 ntBASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 Y_RNA.126-201ENST00000363382 111 ntBASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 Y_RNA.459-201ENST00000384251 102 ntBASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 RNU1-57P-201ENST00000384491 166 ntBASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 MIR32-201ENST00000384965 70 ntBASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 AL512633.1-201ENST00000399931 655 ntBASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 Z98745.1-201ENST00000402553 494 ntBASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 RN7SKP213-201ENST00000410746 298 ntBASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 AC017079.2-201ENST00000416102 485 ntBASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 AC114482.1-201ENST00000418010 247 ntBASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 AC091286.1-201ENST00000431233 461 ntBASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 HMGB1P37-201ENST00000439613 609 ntBASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 AC090525.1-201ENST00000479116 478 ntBASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 ANXA2P1-201ENST00000505539 926 ntBASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 RNU6-1198P-201ENST00000516904 67 ntBASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 RN7SKP272-201ENST00000516988 232 ntBASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 AC022616.4-201ENST00000522985 181 ntBASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 MIR4489-201ENST00000578869 62 ntBASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 MIR4765-201ENST00000585007 77 ntBASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 AL138963.2-201ENST00000605137 226 ntBASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 AC002064.3-201ENST00000623448 346 ntBASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 AL450472.1-202ENST00000637286 180 ntBASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
CLRN3Q8NCR9 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 AL590240.1-201ENST00000334118 313 ntBASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 OR56A5-201ENST00000340110 738 ntBASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 RNU6-1210P-201ENST00000363775 107 ntBASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 SNORD14.1-201ENST00000365609 90 ntBASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 Y_RNA.389-201ENST00000383924 113 ntBASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 MIR186-201ENST00000384988 86 ntBASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 RPS26P42-201ENST00000413485 326 ntBASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 AC113618.1-201ENST00000416747 285 ntBASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 AC097463.2-201ENST00000421074 142 ntBASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 AC012306.1-201ENST00000423267 114 ntBASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 OR2AQ1P-201ENST00000451972 200 ntBASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 RNU7-87P-201ENST00000459343 62 ntBASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 RPS29P12-201ENST00000460178 152 ntBASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 TOMM22P6-201ENST00000465035 409 ntBASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 RPL31P41-201ENST00000477967 372 ntBASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 SEM1P1-201ENST00000506694 209 ntBASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 AC008958.1-201ENST00000511047 682 ntBASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 AP000827.1-201ENST00000527814 258 ntBASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 MIR5188-201ENST00000583467 113 ntBASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 AC011471.1-201ENST00000585766 187 ntBASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 Z98751.3-201ENST00000604447 521 ntBASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 AL391358.1-201ENST00000605342 190 ntBASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 AL132822.1-201ENST00000617063 513 ntBASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 AP002799.1-201ENST00000623552 423 ntBASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLRN3Q8NCR9 AC091812.1-201ENST00000432235 1948 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms