Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 MIR4424-201ENST00000585257 86 ntBASIC2.48□□□□□ -2.01
CCDC63Q8NA47 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.48□□□□□ -2.01
CCDC63Q8NA47 AF250324.2-201ENST00000608299 610 ntBASIC2.48□□□□□ -2.01
CCDC63Q8NA47 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.48□□□□□ -2.01
CCDC63Q8NA47 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC63Q8NA47 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
CCDC63Q8NA47 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC63Q8NA47 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC63Q8NA47 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC63Q8NA47 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
CCDC63Q8NA47 RNU6-1322P-201ENST00000364309 107 ntBASIC2.47□□□□□ -2.01
CCDC63Q8NA47 RNU6-393P-201ENST00000384475 107 ntBASIC2.47□□□□□ -2.01
CCDC63Q8NA47 RNU6-748P-201ENST00000384648 107 ntBASIC2.47□□□□□ -2.01
CCDC63Q8NA47 MIR9-1-201ENST00000385198 89 ntBASIC2.47□□□□□ -2.01
CCDC63Q8NA47 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC63Q8NA47 WARS2P1-201ENST00000429678 537 ntBASIC2.47□□□□□ -2.01
CCDC63Q8NA47 AC104389.3-201ENST00000445629 235 ntBASIC2.47□□□□□ -2.01
CCDC63Q8NA47 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC63Q8NA47 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC63Q8NA47 SNRPFP3-201ENST00000457792 225 ntBASIC2.47□□□□□ -2.01
CCDC63Q8NA47 SRRM1P2-201ENST00000464531 1192 ntBASIC2.47□□□□□ -2.01
CCDC63Q8NA47 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC63Q8NA47 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC63Q8NA47 CCDC34P1-201ENST00000507441 517 ntBASIC2.47□□□□□ -2.01
CCDC63Q8NA47 AC009646.1-201ENST00000510455 318 ntBASIC2.47□□□□□ -2.01
CCDC63Q8NA47 AC074344.1-201ENST00000512823 224 ntBASIC2.47□□□□□ -2.01
CCDC63Q8NA47 LRRC34P2-201ENST00000514850 553 ntBASIC2.47□□□□□ -2.01
CCDC63Q8NA47 Y_RNA.693-201ENST00000516641 110 ntBASIC2.47□□□□□ -2.01
CCDC63Q8NA47 AC243972.3-201ENST00000539655 198 ntBASIC2.47□□□□□ -2.01
CCDC63Q8NA47 AK6P1-201ENST00000540219 478 ntBASIC2.47□□□□□ -2.01
CCDC63Q8NA47 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC63Q8NA47 AC078814.3-201ENST00000553036 491 ntBASIC2.47□□□□□ -2.01
CCDC63Q8NA47 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC63Q8NA47 AC007621.1-201ENST00000604544 437 ntBASIC2.47□□□□□ -2.01
CCDC63Q8NA47 AC093732.2-201ENST00000607950 274 ntBASIC2.47□□□□□ -2.01
CCDC63Q8NA47 AC093788.1-201ENST00000609356 927 ntBASIC2.47□□□□□ -2.01
CCDC63Q8NA47 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.47□□□□□ -2.01
CCDC63Q8NA47 AL031601.2-202ENST00000622650 282 ntBASIC2.47□□□□□ -2.01
CCDC63Q8NA47 AC022418.1-201ENST00000624118 445 ntBASIC2.47□□□□□ -2.01
CCDC63Q8NA47 AC138627.2-201ENST00000624202 601 ntBASIC2.47□□□□□ -2.01
CCDC63Q8NA47 AC139792.2-201ENST00000624218 587 ntBASIC2.47□□□□□ -2.01
CCDC63Q8NA47 AC004777.1-201ENST00000624317 287 ntBASIC2.47□□□□□ -2.01
CCDC63Q8NA47 AP003400.5-201ENST00000624827 617 ntBASIC2.47□□□□□ -2.01
CCDC63Q8NA47 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC63Q8NA47 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
CCDC63Q8NA47 AC080128.1-201ENST00000474389 1917 ntBASIC2.46□□□□□ -2.02
CCDC63Q8NA47 RNU6-1085P-201ENST00000363576 107 ntBASIC2.46□□□□□ -2.02
CCDC63Q8NA47 Y_RNA.372-201ENST00000365599 102 ntBASIC2.46□□□□□ -2.02
CCDC63Q8NA47 SNORA44-201ENST00000384584 132 ntBASIC2.46□□□□□ -2.02
CCDC63Q8NA47 MIR34A-201ENST00000385130 110 ntBASIC2.46□□□□□ -2.02
CCDC63Q8NA47 MIR147B-201ENST00000390185 80 ntBASIC2.46□□□□□ -2.02
CCDC63Q8NA47 SNORA48.7-201ENST00000391302 135 ntBASIC2.46□□□□□ -2.02
CCDC63Q8NA47 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC63Q8NA47 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC63Q8NA47 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC63Q8NA47 RPL7P43-201ENST00000478876 753 ntBASIC2.46□□□□□ -2.02
CCDC63Q8NA47 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC63Q8NA47 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC63Q8NA47 RNU6-506P-201ENST00000516553 94 ntBASIC2.46□□□□□ -2.02
CCDC63Q8NA47 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC63Q8NA47 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC63Q8NA47 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC63Q8NA47 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC63Q8NA47 uc_338.14-201ENST00000613162 166 ntBASIC2.46□□□□□ -2.02
CCDC63Q8NA47 AL449363.1-201ENST00000617815 186 ntBASIC2.46□□□□□ -2.02
CCDC63Q8NA47 MIR7157-201ENST00000635801 60 ntBASIC2.46□□□□□ -2.02
CCDC63Q8NA47 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC63Q8NA47 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC63Q8NA47 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC63Q8NA47 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC63Q8NA47 AL109809.4-201ENST00000603520 2185 ntBASIC2.45□□□□□ -2.02
CCDC63Q8NA47 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC63Q8NA47 MIR21-201ENST00000362134 72 ntBASIC2.45□□□□□ -2.02
CCDC63Q8NA47 MIRLET7G-201ENST00000362280 84 ntBASIC2.45□□□□□ -2.02
CCDC63Q8NA47 SNORA69-201ENST00000383895 132 ntBASIC2.45□□□□□ -2.02
CCDC63Q8NA47 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC63Q8NA47 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.45□□□□□ -2.02
CCDC63Q8NA47 NUP35P1-201ENST00000422734 947 ntBASIC2.45□□□□□ -2.02
CCDC63Q8NA47 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC63Q8NA47 TIMM9P3-201ENST00000428659 274 ntBASIC2.45□□□□□ -2.02
CCDC63Q8NA47 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC63Q8NA47 IFNA11P-201ENST00000446352 526 ntBASIC2.45□□□□□ -2.02
CCDC63Q8NA47 RPL23AP45-201ENST00000476406 468 ntBASIC2.45□□□□□ -2.02
CCDC63Q8NA47 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC63Q8NA47 IGLV3-17-201ENST00000519099 244 ntBASIC2.45□□□□□ -2.02
CCDC63Q8NA47 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC63Q8NA47 AP004607.1-201ENST00000524456 203 ntBASIC2.45□□□□□ -2.02
CCDC63Q8NA47 AC016957.1-201ENST00000534895 309 ntBASIC2.45□□□□□ -2.02
CCDC63Q8NA47 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.45□□□□□ -2.02
CCDC63Q8NA47 MIR5694-201ENST00000581190 76 ntBASIC2.45□□□□□ -2.02
CCDC63Q8NA47 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC63Q8NA47 AL670379.10-201ENST00000604330 253 ntBASIC2.45□□□□□ -2.02
CCDC63Q8NA47 AL670379.9-201ENST00000605428 253 ntBASIC2.45□□□□□ -2.02
CCDC63Q8NA47 HMGB1P24-202ENST00000615653 685 ntBASIC2.45□□□□□ -2.02
CCDC63Q8NA47 RMST_7.1-201ENST00000621935 268 ntBASIC2.45□□□□□ -2.02
CCDC63Q8NA47 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC63Q8NA47 RNU6-859P-201ENST00000362728 107 ntBASIC2.44□□□□□ -2.02
CCDC63Q8NA47 RNA5SP456-201ENST00000364002 114 ntBASIC2.44□□□□□ -2.02
CCDC63Q8NA47 Y_RNA.399-201ENST00000383955 105 ntBASIC2.44□□□□□ -2.02
CCDC63Q8NA47 Y_RNA.481-201ENST00000384373 102 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms