Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC091152.3-201ENST00000604227 325 ntBASIC3.8□□□□□ -1.8
SYNPOQ8N3V7 AL080274.1-201ENST00000605565 220 ntBASIC3.8□□□□□ -1.8
SYNPOQ8N3V7 HMGB1P24-202ENST00000615653 685 ntBASIC3.8□□□□□ -1.8
SYNPOQ8N3V7 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SYNPOQ8N3V7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
SYNPOQ8N3V7 AC009541.1-201ENST00000438279 2662 ntBASIC3.8□□□□□ -1.8
SYNPOQ8N3V7 IPO8P1-201ENST00000455509 3109 ntBASIC3.8□□□□□ -1.8
SYNPOQ8N3V7 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SYNPOQ8N3V7 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
SYNPOQ8N3V7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SYNPOQ8N3V7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SYNPOQ8N3V7 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 RBBP8P1-201ENST00000449447 1844 ntBASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 U3.6-201ENST00000363622 211 ntBASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 RNU1-89P-201ENST00000384592 164 ntBASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 Z92545.1-201ENST00000411782 234 ntBASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 AC096664.2-201ENST00000411843 406 ntBASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 RNU7-152P-201ENST00000458982 64 ntBASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 RPL30P12-201ENST00000474666 353 ntBASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 RPS27P26-201ENST00000494583 239 ntBASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 AC010265.1-201ENST00000513509 211 ntBASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 RNU6-120P-201ENST00000516077 103 ntBASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 SNORD19.2-201ENST00000516978 73 ntBASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 AC009812.2-201ENST00000517657 457 ntBASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 BNIP3P16-201ENST00000589779 534 ntBASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 SNORA62.6-201ENST00000606322 83 ntBASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 AL732372.2-225ENST00000642124 456 ntBASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SYNPOQ8N3V7 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 RNU6-1040P-201ENST00000383974 107 ntBASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 RNU6-1227P-201ENST00000383981 107 ntBASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 RNU6-750P-201ENST00000390946 107 ntBASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 SNORA75.6-201ENST00000391318 127 ntBASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 AC243964.1-201ENST00000441814 261 ntBASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 AC022493.2-201ENST00000506122 481 ntBASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 CYP2C61P-201ENST00000604072 290 ntBASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 MIR486-1-201ENST00000612171 68 ntBASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.78□□□□□ -1.8
SYNPOQ8N3V7 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
SYNPOQ8N3V7 MTND4P27-201ENST00000450813 1354 ntBASIC3.77□□□□□ -1.81
SYNPOQ8N3V7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SYNPOQ8N3V7 RNU6-308P-201ENST00000390957 107 ntBASIC3.77□□□□□ -1.81
SYNPOQ8N3V7 RNA5SP424-201ENST00000390988 115 ntBASIC3.77□□□□□ -1.81
SYNPOQ8N3V7 SNORA11.2-201ENST00000408318 127 ntBASIC3.77□□□□□ -1.81
SYNPOQ8N3V7 AC096649.2-201ENST00000416186 393 ntBASIC3.77□□□□□ -1.81
SYNPOQ8N3V7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.77□□□□□ -1.81
SYNPOQ8N3V7 RBMY2UP-201ENST00000453474 324 ntBASIC3.77□□□□□ -1.81
SYNPOQ8N3V7 BTF3L4P4-201ENST00000506381 449 ntBASIC3.77□□□□□ -1.81
SYNPOQ8N3V7 RAC1P5-201ENST00000512182 576 ntBASIC3.77□□□□□ -1.81
SYNPOQ8N3V7 SNORA31.23-201ENST00000517219 133 ntBASIC3.77□□□□□ -1.81
SYNPOQ8N3V7 CBX3P8-201ENST00000532412 525 ntBASIC3.77□□□□□ -1.81
SYNPOQ8N3V7 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.77□□□□□ -1.81
SYNPOQ8N3V7 AP001836.1-201ENST00000604675 523 ntBASIC3.77□□□□□ -1.81
SYNPOQ8N3V7 AC005000.2-201ENST00000605468 310 ntBASIC3.77□□□□□ -1.81
SYNPOQ8N3V7 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.77□□□□□ -1.81
SYNPOQ8N3V7 FAM35DP-201ENST00000323387 2712 ntBASIC3.77□□□□□ -1.81
SYNPOQ8N3V7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SYNPOQ8N3V7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SYNPOQ8N3V7 MTND5P9-201ENST00000503854 1755 ntBASIC3.76□□□□□ -1.81
SYNPOQ8N3V7 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SYNPOQ8N3V7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SYNPOQ8N3V7 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.76□□□□□ -1.81
SYNPOQ8N3V7 Y_RNA.111-201ENST00000363248 100 ntBASIC3.76□□□□□ -1.81
SYNPOQ8N3V7 Y_RNA.197-201ENST00000364004 102 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms