Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RNA5SP505-201ENST00000364748 108 ntBASIC5.04□□□□□ -1.6
SCUBE3Q8IX30 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCUBE3Q8IX30 SNORA18.3-201ENST00000384122 132 ntBASIC5.04□□□□□ -1.6
SCUBE3Q8IX30 RNU6-140P-201ENST00000384566 108 ntBASIC5.04□□□□□ -1.6
SCUBE3Q8IX30 MIR549A-201ENST00000385268 96 ntBASIC5.04□□□□□ -1.6
SCUBE3Q8IX30 SNORA26.3-201ENST00000391119 136 ntBASIC5.04□□□□□ -1.6
SCUBE3Q8IX30 MIR320B2-201ENST00000408479 138 ntBASIC5.04□□□□□ -1.6
SCUBE3Q8IX30 RNA5SP113-201ENST00000410486 84 ntBASIC5.04□□□□□ -1.6
SCUBE3Q8IX30 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC5.04□□□□□ -1.6
SCUBE3Q8IX30 EIF4HP2-201ENST00000424380 563 ntBASIC5.04□□□□□ -1.6
SCUBE3Q8IX30 AIMP1P2-201ENST00000425294 312 ntBASIC5.04□□□□□ -1.6
SCUBE3Q8IX30 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SCUBE3Q8IX30 AC009237.8-201ENST00000445492 379 ntBASIC5.04□□□□□ -1.6
SCUBE3Q8IX30 AC125238.1-201ENST00000448842 249 ntBASIC5.04□□□□□ -1.6
SCUBE3Q8IX30 AP004371.1-201ENST00000525240 214 ntBASIC5.04□□□□□ -1.6
SCUBE3Q8IX30 MIR3667-201ENST00000581025 74 ntBASIC5.04□□□□□ -1.6
SCUBE3Q8IX30 TEX41-243ENST00000614173 190 ntTSL 5 BASIC5.04□□□□□ -1.6
SCUBE3Q8IX30 AL133383.2-201ENST00000622958 2336 ntBASIC5.04□□□□□ -1.6
SCUBE3Q8IX30 MAPK10-263ENST00000641052 4307 ntBASIC5.04□□□□□ -1.6
SCUBE3Q8IX30 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SCUBE3Q8IX30 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SCUBE3Q8IX30 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCUBE3Q8IX30 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCUBE3Q8IX30 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCUBE3Q8IX30 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.03□□□□□ -1.6
SCUBE3Q8IX30 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
SCUBE3Q8IX30 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SCUBE3Q8IX30 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SCUBE3Q8IX30 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SCUBE3Q8IX30 Y_RNA.294-201ENST00000364916 102 ntBASIC5.03□□□□□ -1.6
SCUBE3Q8IX30 RNU6-1264P-201ENST00000383891 107 ntBASIC5.03□□□□□ -1.6
SCUBE3Q8IX30 RPL18P10-201ENST00000425606 538 ntBASIC5.03□□□□□ -1.6
SCUBE3Q8IX30 AL714022.1-201ENST00000439897 151 ntBASIC5.03□□□□□ -1.6
SCUBE3Q8IX30 RPL39P29-201ENST00000447779 157 ntBASIC5.03□□□□□ -1.6
SCUBE3Q8IX30 RPL26P9-201ENST00000457466 433 ntBASIC5.03□□□□□ -1.6
SCUBE3Q8IX30 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.03□□□□□ -1.6
SCUBE3Q8IX30 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.03□□□□□ -1.6
SCUBE3Q8IX30 AC091868.1-201ENST00000508746 304 ntBASIC5.03□□□□□ -1.6
SCUBE3Q8IX30 RN7SKP276-201ENST00000516242 268 ntBASIC5.03□□□□□ -1.6
SCUBE3Q8IX30 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC5.03□□□□□ -1.6
SCUBE3Q8IX30 MIR1254-2-201ENST00000579553 63 ntBASIC5.03□□□□□ -1.6
SCUBE3Q8IX30 AC022893.2-201ENST00000564832 3296 ntBASIC5.03□□□□□ -1.6
SCUBE3Q8IX30 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SCUBE3Q8IX30 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SCUBE3Q8IX30 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SCUBE3Q8IX30 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SCUBE3Q8IX30 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SCUBE3Q8IX30 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SCUBE3Q8IX30 CENPCP1-201ENST00000533085 2578 ntBASIC5.03□□□□□ -1.6
SCUBE3Q8IX30 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
SCUBE3Q8IX30 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 AC090971.4-201ENST00000560291 1800 ntBASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 AL136164.4-201ENST00000625013 2135 ntBASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 RNU6-1205P-201ENST00000363625 106 ntBASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 RNU1-100P-201ENST00000365255 165 ntBASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 Y_RNA.495-201ENST00000384435 112 ntBASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 RNU1-82P-201ENST00000390851 165 ntBASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 AL031003.1-201ENST00000404229 172 ntBASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 AC092047.1-201ENST00000424997 240 ntBASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 MTCO1P44-201ENST00000441935 243 ntBASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 RNU6-107P-201ENST00000516643 102 ntBASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 SNORA31.23-201ENST00000517219 133 ntBASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 AC233702.9-201ENST00000581528 203 ntBASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 AL670379.3-201ENST00000605040 251 ntBASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 MIR6134-201ENST00000617606 109 ntBASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 AC015914.2-201ENST00000618167 288 ntBASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 MIR7703-201ENST00000620784 77 ntBASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SCUBE3Q8IX30 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.01□□□□□ -1.61
SCUBE3Q8IX30 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SCUBE3Q8IX30 STX3-208ENST00000641815 3236 ntBASIC5.01□□□□□ -1.61
SCUBE3Q8IX30 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SCUBE3Q8IX30 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.01□□□□□ -1.61
SCUBE3Q8IX30 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
SCUBE3Q8IX30 Y_RNA.229-201ENST00000364347 113 ntBASIC5.01□□□□□ -1.61
SCUBE3Q8IX30 Y_RNA.368-201ENST00000365547 113 ntBASIC5.01□□□□□ -1.61
SCUBE3Q8IX30 Y_RNA.584-201ENST00000391090 114 ntBASIC5.01□□□□□ -1.61
SCUBE3Q8IX30 AL591034.1-201ENST00000407447 340 ntBASIC5.01□□□□□ -1.61
SCUBE3Q8IX30 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.01□□□□□ -1.61
SCUBE3Q8IX30 AC244098.2-201ENST00000422068 99 ntBASIC5.01□□□□□ -1.61
SCUBE3Q8IX30 CKS1BP6-201ENST00000424932 240 ntBASIC5.01□□□□□ -1.61
SCUBE3Q8IX30 Y_RNA.651-201ENST00000459380 103 ntBASIC5.01□□□□□ -1.61
SCUBE3Q8IX30 AC006517.1-201ENST00000480485 328 ntBASIC5.01□□□□□ -1.61
SCUBE3Q8IX30 SCARNA22-201ENST00000503991 125 ntBASIC5.01□□□□□ -1.61
SCUBE3Q8IX30 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.01□□□□□ -1.61
SCUBE3Q8IX30 SNORA70.16-201ENST00000516390 95 ntBASIC5.01□□□□□ -1.61
SCUBE3Q8IX30 MIR4472-2-201ENST00000582069 67 ntBASIC5.01□□□□□ -1.61
SCUBE3Q8IX30 AL391358.1-201ENST00000605342 190 ntBASIC5.01□□□□□ -1.61
SCUBE3Q8IX30 AC012640.5-201ENST00000623897 319 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms