Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 FTLP6-201ENST00000355274 422 ntBASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 RNU6-290P-201ENST00000365212 101 ntBASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 RNU6-898P-201ENST00000365627 104 ntBASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 RNU6-17P-201ENST00000384245 107 ntBASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 RNU6-18P-201ENST00000384527 107 ntBASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 UBA52P6-201ENST00000399822 382 ntBASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 AL138878.1-201ENST00000405131 347 ntBASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 RAB9AP3-201ENST00000412737 573 ntBASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 RPL21P66-201ENST00000426566 466 ntBASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 COX6B1P7-201ENST00000430845 235 ntBASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 AC016700.2-201ENST00000446011 156 ntBASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 RAB9AP1-201ENST00000449393 573 ntBASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 AC010618.1-201ENST00000469924 477 ntBASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 RN7SL860P-201ENST00000473738 223 ntBASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 RPL31P13-201ENST00000484151 370 ntBASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 AC091874.1-201ENST00000511402 339 ntBASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 RN7SKP122-201ENST00000515923 296 ntBASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 SNORA31.9-201ENST00000516429 84 ntBASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 AP004607.1-201ENST00000524456 203 ntBASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 H3F3AP1-201ENST00000559984 334 ntBASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 AC024153.1-201ENST00000603103 365 ntBASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 MIR6716-201ENST00000613413 80 ntBASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 AL445567.2-201ENST00000618935 498 ntBASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.92□□□□□ -1.78
RNF111Q6ZNA4 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 Y_RNA.199-201ENST00000364014 102 ntBASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 RNU6-318P-201ENST00000384283 103 ntBASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 MIR493-201ENST00000385254 89 ntBASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 PCNPP3-201ENST00000393579 471 ntBASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 RHEBP3-201ENST00000411920 351 ntBASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 AC017079.2-201ENST00000416102 485 ntBASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 AP000907.1-201ENST00000428428 510 ntBASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 AL031659.1-201ENST00000447075 539 ntBASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 HSPE1P25-201ENST00000455484 251 ntBASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 RN7SL385P-201ENST00000468873 276 ntBASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 AP000870.1-201ENST00000472927 406 ntBASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 AL132838.2-201ENST00000492041 314 ntBASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 AC099522.1-202ENST00000514718 367 ntBASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 RNU6-703P-201ENST00000516946 107 ntBASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 MRPL49P2-201ENST00000521066 465 ntBASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 AP003730.1-201ENST00000524605 285 ntBASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 AC083809.1-201ENST00000615051 472 ntBASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 MIR8059-201ENST00000620427 81 ntBASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 AC127459.3-201ENST00000624328 466 ntBASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RNF111Q6ZNA4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RNF111Q6ZNA4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RNF111Q6ZNA4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.9□□□□□ -1.78
RNF111Q6ZNA4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
RNF111Q6ZNA4 RNU4-90P-201ENST00000362773 141 ntBASIC3.9□□□□□ -1.79
RNF111Q6ZNA4 RNU6-1286P-201ENST00000383871 107 ntBASIC3.9□□□□□ -1.79
RNF111Q6ZNA4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
RNF111Q6ZNA4 AL033519.2-201ENST00000403958 392 ntBASIC3.9□□□□□ -1.79
RNF111Q6ZNA4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.9□□□□□ -1.79
RNF111Q6ZNA4 RPS15AP7-201ENST00000439294 405 ntBASIC3.9□□□□□ -1.79
RNF111Q6ZNA4 AC243964.1-201ENST00000441814 261 ntBASIC3.9□□□□□ -1.79
RNF111Q6ZNA4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.9□□□□□ -1.79
RNF111Q6ZNA4 AF186996.7-201ENST00000492781 209 ntBASIC3.9□□□□□ -1.79
RNF111Q6ZNA4 RNU1-103P-201ENST00000516502 125 ntBASIC3.9□□□□□ -1.79
RNF111Q6ZNA4 AP006245.1-201ENST00000522549 120 ntBASIC3.9□□□□□ -1.79
RNF111Q6ZNA4 AC024405.2-202ENST00000532731 184 ntBASIC3.9□□□□□ -1.79
RNF111Q6ZNA4 CYCSP29-201ENST00000533731 318 ntBASIC3.9□□□□□ -1.79
RNF111Q6ZNA4 LINC00933-203ENST00000559812 219 ntBASIC3.9□□□□□ -1.79
RNF111Q6ZNA4 RMST_6.1-201ENST00000611980 203 ntBASIC3.9□□□□□ -1.79
RNF111Q6ZNA4 AC023043.4-201ENST00000612081 449 ntBASIC3.9□□□□□ -1.79
RNF111Q6ZNA4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
RNF111Q6ZNA4 AC091903.1-201ENST00000624322 454 ntBASIC3.9□□□□□ -1.79
RNF111Q6ZNA4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RNF111Q6ZNA4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RNF111Q6ZNA4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
RNF111Q6ZNA4 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
RNF111Q6ZNA4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
RNF111Q6ZNA4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms