Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 SNORA75B-201ENST00000384053 137 ntBASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 RNU5A-6P-201ENST00000384136 116 ntBASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 MIR1-2-201ENST00000384961 85 ntBASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 MIR524-201ENST00000385242 87 ntBASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 RNU6-550P-201ENST00000391057 101 ntBASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 MIR548F1-201ENST00000408667 84 ntBASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 RNU2-29P-201ENST00000410423 189 ntBASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 Y_RNA.604-201ENST00000410574 102 ntBASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 MTND1P23-201ENST00000416931 372 ntBASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 EIF4EP4-201ENST00000424916 578 ntBASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 snoU109.2-201ENST00000459316 135 ntBASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 AC090096.1-201ENST00000489168 390 ntBASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 AC009063.1-201ENST00000563342 702 ntBASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 MIR4528-201ENST00000577763 90 ntBASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 AC021646.1-201ENST00000605469 484 ntBASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 RMST_4.1-201ENST00000616886 107 ntBASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 U4atac.1-201ENST00000618345 95 ntBASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.41□□□□□ -2.02
NHLRC1Q6VVB1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
NHLRC1Q6VVB1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.4□□□□□ -2.02
NHLRC1Q6VVB1 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
NHLRC1Q6VVB1 RNU6-1010P-201ENST00000362757 107 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 SNORD3E-201ENST00000362899 217 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 SNORA5B-201ENST00000363786 132 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 RNU6-1029P-201ENST00000384109 107 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 RNU6-45P-201ENST00000384471 107 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 AL356057.3-201ENST00000402607 340 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 CIR1P3-201ENST00000405137 479 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 EEF1A1P40-201ENST00000412883 573 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 CYCSP48-201ENST00000417124 323 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 AC003685.2-201ENST00000422795 395 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 AC073464.1-201ENST00000429823 534 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 AC087499.2-201ENST00000432861 149 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 DNAJC19P4-201ENST00000440115 345 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 RBMX2P4-201ENST00000441256 376 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 AC124916.1-201ENST00000444020 547 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 AL360271.2-201ENST00000447710 161 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 AC132479.1-201ENST00000449160 144 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 AC006512.1-201ENST00000468816 291 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 RPS3AP17-201ENST00000472594 777 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 AC011005.2-201ENST00000487324 359 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 AC011352.1-201ENST00000512300 793 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 SMURF2P1-201ENST00000514992 481 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 AP005902.1-201ENST00000521358 186 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 AC073410.2-201ENST00000603240 332 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 NDUFA8P1-201ENST00000605525 367 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 Z82243.1-201ENST00000609432 473 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 AC091834.1-201ENST00000614543 472 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 HMGB1P24-202ENST00000615653 685 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 AC005609.4-201ENST00000625071 447 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 MIR203B-201ENST00000636080 86 ntBASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
NHLRC1Q6VVB1 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
NHLRC1Q6VVB1 Y_RNA.296-201ENST00000364930 108 ntBASIC2.39□□□□□ -2.03
NHLRC1Q6VVB1 Y_RNA.480-201ENST00000384364 102 ntBASIC2.39□□□□□ -2.03
NHLRC1Q6VVB1 RNU6-1072P-201ENST00000384703 107 ntBASIC2.39□□□□□ -2.03
NHLRC1Q6VVB1 RNU6-443P-201ENST00000384780 107 ntBASIC2.39□□□□□ -2.03
NHLRC1Q6VVB1 MIR592-201ENST00000384959 97 ntBASIC2.39□□□□□ -2.03
NHLRC1Q6VVB1 RNA5SP390-201ENST00000410191 113 ntBASIC2.39□□□□□ -2.03
NHLRC1Q6VVB1 RN7SKP158-201ENST00000410453 326 ntBASIC2.39□□□□□ -2.03
NHLRC1Q6VVB1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.39□□□□□ -2.03
NHLRC1Q6VVB1 OR9R1P-201ENST00000412200 877 ntBASIC2.39□□□□□ -2.03
NHLRC1Q6VVB1 AL096701.2-201ENST00000416920 238 ntBASIC2.39□□□□□ -2.03
NHLRC1Q6VVB1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.39□□□□□ -2.03
NHLRC1Q6VVB1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.39□□□□□ -2.03
NHLRC1Q6VVB1 MTATP6P23-201ENST00000440153 476 ntBASIC2.39□□□□□ -2.03
NHLRC1Q6VVB1 MTND4P18-201ENST00000447010 465 ntBASIC2.39□□□□□ -2.03
NHLRC1Q6VVB1 FTH1P25-201ENST00000447665 469 ntBASIC2.39□□□□□ -2.03
NHLRC1Q6VVB1 AC079448.1-201ENST00000449377 373 ntBASIC2.39□□□□□ -2.03
NHLRC1Q6VVB1 AL139109.1-201ENST00000455491 297 ntBASIC2.39□□□□□ -2.03
NHLRC1Q6VVB1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms