Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RPS6P12-201ENST00000432491 726 ntBASIC4.37□□□□□ -1.71
RNF43Q68DV7 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.37□□□□□ -1.71
RNF43Q68DV7 RPS29P7-201ENST00000439662 171 ntBASIC4.37□□□□□ -1.71
RNF43Q68DV7 AC016700.2-201ENST00000446011 156 ntBASIC4.37□□□□□ -1.71
RNF43Q68DV7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.37□□□□□ -1.71
RNF43Q68DV7 RNU6-927P-201ENST00000516199 100 ntBASIC4.37□□□□□ -1.71
RNF43Q68DV7 RNU7-110P-201ENST00000516891 62 ntBASIC4.37□□□□□ -1.71
RNF43Q68DV7 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.37□□□□□ -1.71
RNF43Q68DV7 RPL21P9-201ENST00000556149 474 ntBASIC4.37□□□□□ -1.71
RNF43Q68DV7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.37□□□□□ -1.71
RNF43Q68DV7 AC060766.3-201ENST00000591442 263 ntBASIC4.37□□□□□ -1.71
RNF43Q68DV7 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.37□□□□□ -1.71
RNF43Q68DV7 MIR7151-201ENST00000617477 60 ntBASIC4.37□□□□□ -1.71
RNF43Q68DV7 AC073349.3-201ENST00000617616 186 ntBASIC4.37□□□□□ -1.71
RNF43Q68DV7 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.37□□□□□ -1.71
RNF43Q68DV7 ZNF962P-201ENST00000443465 3140 ntBASIC4.37□□□□□ -1.71
RNF43Q68DV7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.37□□□□□ -1.71
RNF43Q68DV7 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RNF43Q68DV7 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF43Q68DV7 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
RNF43Q68DV7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
RNF43Q68DV7 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RNF43Q68DV7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF43Q68DV7 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RNF43Q68DV7 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
RNF43Q68DV7 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RNF43Q68DV7 SNORD66.1-201ENST00000391230 76 ntBASIC4.36□□□□□ -1.71
RNF43Q68DV7 RNU5A-5P-201ENST00000411054 116 ntBASIC4.36□□□□□ -1.71
RNF43Q68DV7 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RNF43Q68DV7 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF43Q68DV7 SNORD2.1-201ENST00000458762 69 ntBASIC4.36□□□□□ -1.71
RNF43Q68DV7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF43Q68DV7 SNORA27.4-201ENST00000516650 95 ntBASIC4.36□□□□□ -1.71
RNF43Q68DV7 SCARNA13-201ENST00000516672 275 ntBASIC4.36□□□□□ -1.71
RNF43Q68DV7 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF43Q68DV7 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF43Q68DV7 AC008121.1-201ENST00000603244 268 ntBASIC4.36□□□□□ -1.71
RNF43Q68DV7 AC099669.2-201ENST00000616549 437 ntBASIC4.36□□□□□ -1.71
RNF43Q68DV7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF43Q68DV7 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF43Q68DV7 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
RNF43Q68DV7 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
RNF43Q68DV7 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF43Q68DV7 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RNF43Q68DV7 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.35□□□□□ -1.71
RNF43Q68DV7 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF43Q68DV7 Y_RNA.215-201ENST00000364204 112 ntBASIC4.35□□□□□ -1.71
RNF43Q68DV7 RNA5SP205-201ENST00000364653 136 ntBASIC4.35□□□□□ -1.71
RNF43Q68DV7 RNU6-712P-201ENST00000410558 100 ntBASIC4.35□□□□□ -1.71
RNF43Q68DV7 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF43Q68DV7 AL158156.1-201ENST00000422509 473 ntBASIC4.35□□□□□ -1.71
RNF43Q68DV7 YME1L1P1-201ENST00000429435 297 ntBASIC4.35□□□□□ -1.71
RNF43Q68DV7 AL358472.1-201ENST00000431295 329 ntBASIC4.35□□□□□ -1.71
RNF43Q68DV7 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF43Q68DV7 AC008267.6-201ENST00000441664 139 ntBASIC4.35□□□□□ -1.71
RNF43Q68DV7 snoU13.30-201ENST00000458951 104 ntBASIC4.35□□□□□ -1.71
RNF43Q68DV7 AC006517.1-201ENST00000480485 328 ntBASIC4.35□□□□□ -1.71
RNF43Q68DV7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF43Q68DV7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.35□□□□□ -1.71
RNF43Q68DV7 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF43Q68DV7 MIR4512-201ENST00000583257 77 ntBASIC4.35□□□□□ -1.71
RNF43Q68DV7 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF43Q68DV7 AC020914.4-201ENST00000597690 277 ntBASIC4.35□□□□□ -1.71
RNF43Q68DV7 AC005046.1-201ENST00000608515 625 ntBASIC4.35□□□□□ -1.71
RNF43Q68DV7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF43Q68DV7 AL360181.4-201ENST00000621752 134 ntBASIC4.35□□□□□ -1.71
RNF43Q68DV7 AL109809.4-201ENST00000603520 2185 ntBASIC4.35□□□□□ -1.71
RNF43Q68DV7 AC106871.1-201ENST00000568324 3102 ntBASIC4.35□□□□□ -1.71
RNF43Q68DV7 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF43Q68DV7 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF43Q68DV7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF43Q68DV7 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.35□□□□□ -1.71
RNF43Q68DV7 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.35□□□□□ -1.71
RNF43Q68DV7 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF43Q68DV7 ASNSP1-201ENST00000518311 1939 ntBASIC4.34□□□□□ -1.71
RNF43Q68DV7 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
RNF43Q68DV7 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.34□□□□□ -1.71
RNF43Q68DV7 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RNF43Q68DV7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
RNF43Q68DV7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.34□□□□□ -1.71
RNF43Q68DV7 MIR412-201ENST00000362142 91 ntBASIC4.34□□□□□ -1.71
RNF43Q68DV7 SNORA63.1-201ENST00000362493 131 ntBASIC4.34□□□□□ -1.71
RNF43Q68DV7 RNU6-879P-201ENST00000364328 108 ntBASIC4.34□□□□□ -1.71
RNF43Q68DV7 Y_RNA.261-201ENST00000364631 102 ntBASIC4.34□□□□□ -1.71
RNF43Q68DV7 Y_RNA.446-201ENST00000384178 104 ntBASIC4.34□□□□□ -1.71
RNF43Q68DV7 SNORA36C-201ENST00000384289 132 ntBASIC4.34□□□□□ -1.71
RNF43Q68DV7 MIR449B-201ENST00000384995 97 ntBASIC4.34□□□□□ -1.71
RNF43Q68DV7 RPS4XP3-201ENST00000398541 413 ntBASIC4.34□□□□□ -1.71
RNF43Q68DV7 RPL21P65-201ENST00000406094 466 ntBASIC4.34□□□□□ -1.71
RNF43Q68DV7 GOT2P5-201ENST00000433995 546 ntBASIC4.34□□□□□ -1.71
RNF43Q68DV7 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.34□□□□□ -1.71
RNF43Q68DV7 PTMAP3-201ENST00000447474 330 ntBASIC4.34□□□□□ -1.71
RNF43Q68DV7 AC007395.1-201ENST00000451333 677 ntBASIC4.34□□□□□ -1.71
RNF43Q68DV7 AC114982.1-201ENST00000469402 321 ntBASIC4.34□□□□□ -1.71
RNF43Q68DV7 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.34□□□□□ -1.71
RNF43Q68DV7 RNA5SP272-201ENST00000516095 111 ntBASIC4.34□□□□□ -1.71
RNF43Q68DV7 RNU6-426P-201ENST00000516464 97 ntBASIC4.34□□□□□ -1.71
RNF43Q68DV7 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.34□□□□□ -1.71
RNF43Q68DV7 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.34□□□□□ -1.71
RNF43Q68DV7 AC005476.1-201ENST00000554427 397 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 444.6 ms