Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 MIR1290-201ENST00000408735 78 ntBASIC5.02□□□□□ -1.61
RNF20Q5VTR2 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF20Q5VTR2 SNRPEP9-201ENST00000436794 238 ntBASIC5.02□□□□□ -1.61
RNF20Q5VTR2 AC243964.1-201ENST00000441814 261 ntBASIC5.02□□□□□ -1.61
RNF20Q5VTR2 AC096638.1-201ENST00000444678 216 ntBASIC5.02□□□□□ -1.61
RNF20Q5VTR2 MRPS10P1-201ENST00000448483 130 ntBASIC5.02□□□□□ -1.61
RNF20Q5VTR2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF20Q5VTR2 RPL23AP3-201ENST00000453844 468 ntBASIC5.02□□□□□ -1.61
RNF20Q5VTR2 RPS23P1-201ENST00000491662 432 ntBASIC5.02□□□□□ -1.61
RNF20Q5VTR2 RNU6-567P-201ENST00000516746 107 ntBASIC5.02□□□□□ -1.61
RNF20Q5VTR2 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF20Q5VTR2 AC025884.1-201ENST00000556034 378 ntBASIC5.02□□□□□ -1.61
RNF20Q5VTR2 UBL5P4-201ENST00000562584 236 ntBASIC5.02□□□□□ -1.61
RNF20Q5VTR2 AC136601.2-201ENST00000604356 474 ntBASIC5.02□□□□□ -1.61
RNF20Q5VTR2 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF20Q5VTR2 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF20Q5VTR2 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
RNF20Q5VTR2 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.02□□□□□ -1.61
RNF20Q5VTR2 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
RNF20Q5VTR2 AC018529.3-201ENST00000624212 2254 ntBASIC5.01□□□□□ -1.61
RNF20Q5VTR2 MIR410-201ENST00000362222 80 ntBASIC5.01□□□□□ -1.61
RNF20Q5VTR2 RNU6-961P-201ENST00000363893 105 ntBASIC5.01□□□□□ -1.61
RNF20Q5VTR2 RNA5SP509-201ENST00000364577 119 ntBASIC5.01□□□□□ -1.61
RNF20Q5VTR2 SNORA29-201ENST00000384183 140 ntBASIC5.01□□□□□ -1.61
RNF20Q5VTR2 RNU6-1135P-201ENST00000411083 103 ntBASIC5.01□□□□□ -1.61
RNF20Q5VTR2 RNU6-1001P-201ENST00000411265 100 ntBASIC5.01□□□□□ -1.61
RNF20Q5VTR2 EIF1AXP1-201ENST00000419267 435 ntBASIC5.01□□□□□ -1.61
RNF20Q5VTR2 MTCO1P5-201ENST00000433573 344 ntBASIC5.01□□□□□ -1.61
RNF20Q5VTR2 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.01□□□□□ -1.61
RNF20Q5VTR2 SNORD108-201ENST00000459332 71 ntBASIC5.01□□□□□ -1.61
RNF20Q5VTR2 AC011276.1-201ENST00000469688 323 ntBASIC5.01□□□□□ -1.61
RNF20Q5VTR2 RN7SL303P-201ENST00000469773 251 ntBASIC5.01□□□□□ -1.61
RNF20Q5VTR2 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF20Q5VTR2 HMGB1P22-201ENST00000505315 124 ntBASIC5.01□□□□□ -1.61
RNF20Q5VTR2 AC093840.1-201ENST00000511599 336 ntBASIC5.01□□□□□ -1.61
RNF20Q5VTR2 RNU6-1219P-201ENST00000516143 112 ntBASIC5.01□□□□□ -1.61
RNF20Q5VTR2 SNORA70.16-201ENST00000516390 95 ntBASIC5.01□□□□□ -1.61
RNF20Q5VTR2 SNORA27.4-201ENST00000516650 95 ntBASIC5.01□□□□□ -1.61
RNF20Q5VTR2 RN7SKP49-201ENST00000516675 260 ntBASIC5.01□□□□□ -1.61
RNF20Q5VTR2 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF20Q5VTR2 TRAV28-201ENST00000557548 323 ntBASIC5.01□□□□□ -1.61
RNF20Q5VTR2 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC5.01□□□□□ -1.61
RNF20Q5VTR2 CYCSP39-201ENST00000565821 309 ntBASIC5.01□□□□□ -1.61
RNF20Q5VTR2 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF20Q5VTR2 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC5.01□□□□□ -1.61
RNF20Q5VTR2 AC020895.1-201ENST00000595362 272 ntBASIC5.01□□□□□ -1.61
RNF20Q5VTR2 AC006001.4-201ENST00000622243 395 ntBASIC5.01□□□□□ -1.61
RNF20Q5VTR2 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF20Q5VTR2 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF20Q5VTR2 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF20Q5VTR2 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF20Q5VTR2 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RNF20Q5VTR2 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RNF20Q5VTR2 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF20Q5VTR2 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5□□□□□ -1.61
RNF20Q5VTR2 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5□□□□□ -1.61
RNF20Q5VTR2 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5□□□□□ -1.61
RNF20Q5VTR2 AL353743.1-202ENST00000431724 1695 ntBASIC5□□□□□ -1.61
RNF20Q5VTR2 RNU1-132P-201ENST00000364300 164 ntBASIC5□□□□□ -1.61
RNF20Q5VTR2 RNU6-1175P-201ENST00000365200 107 ntBASIC5□□□□□ -1.61
RNF20Q5VTR2 U3.15-201ENST00000365398 212 ntBASIC5□□□□□ -1.61
RNF20Q5VTR2 RNU6-81P-201ENST00000365608 104 ntBASIC5□□□□□ -1.61
RNF20Q5VTR2 RNU6-1181P-201ENST00000384191 106 ntBASIC5□□□□□ -1.61
RNF20Q5VTR2 Y_RNA.570-201ENST00000384750 101 ntBASIC5□□□□□ -1.61
RNF20Q5VTR2 MIR487A-201ENST00000385009 80 ntBASIC5□□□□□ -1.61
RNF20Q5VTR2 MIR10B-201ENST00000385011 110 ntBASIC5□□□□□ -1.61
RNF20Q5VTR2 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5□□□□□ -1.61
RNF20Q5VTR2 AL732292.1-201ENST00000426692 226 ntBASIC5□□□□□ -1.61
RNF20Q5VTR2 AL590383.1-201ENST00000428602 75 ntBASIC5□□□□□ -1.61
RNF20Q5VTR2 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5□□□□□ -1.61
RNF20Q5VTR2 SETP5-201ENST00000437270 562 ntBASIC5□□□□□ -1.61
RNF20Q5VTR2 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5□□□□□ -1.61
RNF20Q5VTR2 snoU13.4-201ENST00000458916 104 ntBASIC5□□□□□ -1.61
RNF20Q5VTR2 TVP23BP1-201ENST00000557500 617 ntBASIC5□□□□□ -1.61
RNF20Q5VTR2 KLKP1-201ENST00000595979 403 ntBASIC5□□□□□ -1.61
RNF20Q5VTR2 AC024153.1-201ENST00000603103 365 ntBASIC5□□□□□ -1.61
RNF20Q5VTR2 Clostridiales-1.2-201ENST00000636724 160 ntBASIC5□□□□□ -1.61
RNF20Q5VTR2 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5□□□□□ -1.61
RNF20Q5VTR2 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5□□□□□ -1.61
RNF20Q5VTR2 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5□□□□□ -1.61
RNF20Q5VTR2 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5□□□□□ -1.61
RNF20Q5VTR2 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF20Q5VTR2 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF20Q5VTR2 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF20Q5VTR2 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF20Q5VTR2 AC007390.2-201ENST00000606229 3803 ntBASIC4.99□□□□□ -1.61
RNF20Q5VTR2 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF20Q5VTR2 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF20Q5VTR2 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF20Q5VTR2 UBE2WP1-201ENST00000362030 340 ntBASIC4.99□□□□□ -1.61
RNF20Q5VTR2 HLFP1-201ENST00000402375 499 ntBASIC4.99□□□□□ -1.61
RNF20Q5VTR2 U3.39-201ENST00000408569 239 ntBASIC4.99□□□□□ -1.61
RNF20Q5VTR2 POLR2KP2-201ENST00000438155 177 ntBASIC4.99□□□□□ -1.61
RNF20Q5VTR2 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF20Q5VTR2 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF20Q5VTR2 AC009237.7-201ENST00000447357 229 ntBASIC4.99□□□□□ -1.61
RNF20Q5VTR2 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF20Q5VTR2 SNRPGP7-201ENST00000469016 106 ntBASIC4.99□□□□□ -1.61
RNF20Q5VTR2 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF20Q5VTR2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms