Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 AC245102.2-201ENST00000448956 180 ntBASIC7.39□□□□□ -1.23
NCBP3Q53F19 NXT1P1-201ENST00000458481 316 ntBASIC7.39□□□□□ -1.23
NCBP3Q53F19 RNU6-240P-201ENST00000516098 97 ntBASIC7.39□□□□□ -1.23
NCBP3Q53F19 IGKV3D-34-201ENST00000522638 302 ntBASIC7.39□□□□□ -1.23
NCBP3Q53F19 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC7.39□□□□□ -1.23
NCBP3Q53F19 RPL17P51-201ENST00000605218 238 ntBASIC7.39□□□□□ -1.23
NCBP3Q53F19 RNU6-91P-201ENST00000607774 107 ntBASIC7.39□□□□□ -1.23
NCBP3Q53F19 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC7.39□□□□□ -1.23
NCBP3Q53F19 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NCBP3Q53F19 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
NCBP3Q53F19 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
NCBP3Q53F19 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC7.38□□□□□ -1.23
NCBP3Q53F19 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
NCBP3Q53F19 RNU6-1210P-201ENST00000363775 107 ntBASIC7.38□□□□□ -1.23
NCBP3Q53F19 RNU6-748P-201ENST00000384648 107 ntBASIC7.38□□□□□ -1.23
NCBP3Q53F19 YME1L1P1-201ENST00000429435 297 ntBASIC7.38□□□□□ -1.23
NCBP3Q53F19 TMEM183AP1-205ENST00000432739 290 ntBASIC7.38□□□□□ -1.23
NCBP3Q53F19 VDAC1P3-201ENST00000434069 851 ntBASIC7.38□□□□□ -1.23
NCBP3Q53F19 AC018634.1-201ENST00000437554 401 ntBASIC7.38□□□□□ -1.23
NCBP3Q53F19 RN7SL807P-201ENST00000470923 297 ntBASIC7.38□□□□□ -1.23
NCBP3Q53F19 RN7SL284P-201ENST00000498823 275 ntBASIC7.38□□□□□ -1.23
NCBP3Q53F19 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC7.38□□□□□ -1.23
NCBP3Q53F19 SNORD46.2-201ENST00000516021 102 ntBASIC7.38□□□□□ -1.23
NCBP3Q53F19 RNU6-830P-201ENST00000516353 107 ntBASIC7.38□□□□□ -1.23
NCBP3Q53F19 RNU5F-4P-201ENST00000516581 114 ntBASIC7.38□□□□□ -1.23
NCBP3Q53F19 HMGN2P15-201ENST00000585707 270 ntBASIC7.38□□□□□ -1.23
NCBP3Q53F19 AC091152.3-201ENST00000604227 325 ntBASIC7.38□□□□□ -1.23
NCBP3Q53F19 IGLL4P-201ENST00000614590 133 ntBASIC7.38□□□□□ -1.23
NCBP3Q53F19 AC005086.4-201ENST00000623065 213 ntBASIC7.38□□□□□ -1.23
NCBP3Q53F19 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NCBP3Q53F19 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
NCBP3Q53F19 AC080128.1-201ENST00000474389 1917 ntBASIC7.38□□□□□ -1.23
NCBP3Q53F19 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
NCBP3Q53F19 AC026241.1-201ENST00000517873 2142 ntBASIC7.37□□□□□ -1.23
NCBP3Q53F19 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NCBP3Q53F19 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NCBP3Q53F19 OR14L1P-202ENST00000641545 3009 ntBASIC7.37□□□□□ -1.23
NCBP3Q53F19 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
NCBP3Q53F19 RNU6-50P-201ENST00000362356 103 ntBASIC7.37□□□□□ -1.23
NCBP3Q53F19 RNU6-655P-201ENST00000362858 107 ntBASIC7.37□□□□□ -1.23
NCBP3Q53F19 Y_RNA.265-201ENST00000364677 108 ntBASIC7.37□□□□□ -1.23
NCBP3Q53F19 AL009179.1-201ENST00000406085 265 ntBASIC7.37□□□□□ -1.23
NCBP3Q53F19 AC073465.2-201ENST00000440938 498 ntBASIC7.37□□□□□ -1.23
NCBP3Q53F19 AL391987.1-201ENST00000441025 200 ntBASIC7.37□□□□□ -1.23
NCBP3Q53F19 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC7.37□□□□□ -1.23
NCBP3Q53F19 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
NCBP3Q53F19 AC008155.2-201ENST00000464337 397 ntBASIC7.37□□□□□ -1.23
NCBP3Q53F19 RPL35AP15-201ENST00000468042 339 ntBASIC7.37□□□□□ -1.23
NCBP3Q53F19 RN7SL273P-201ENST00000481561 299 ntBASIC7.37□□□□□ -1.23
NCBP3Q53F19 RNU6-1098P-201ENST00000516772 96 ntBASIC7.37□□□□□ -1.23
NCBP3Q53F19 SNORA43.3-201ENST00000517240 103 ntBASIC7.37□□□□□ -1.23
NCBP3Q53F19 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC7.37□□□□□ -1.23
NCBP3Q53F19 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC7.37□□□□□ -1.23
NCBP3Q53F19 RNA5SP440-201ENST00000612665 119 ntBASIC7.37□□□□□ -1.23
NCBP3Q53F19 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC7.37□□□□□ -1.23
NCBP3Q53F19 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
NCBP3Q53F19 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
NCBP3Q53F19 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
NCBP3Q53F19 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NCBP3Q53F19 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
NCBP3Q53F19 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NCBP3Q53F19 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
NCBP3Q53F19 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
NCBP3Q53F19 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NCBP3Q53F19 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC7.36□□□□□ -1.23
NCBP3Q53F19 RNA5SP326-201ENST00000363209 110 ntBASIC7.36□□□□□ -1.23
NCBP3Q53F19 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC7.36□□□□□ -1.23
NCBP3Q53F19 AL441985.1-201ENST00000457727 251 ntBASIC7.36□□□□□ -1.23
NCBP3Q53F19 AC093663.1-201ENST00000497190 394 ntBASIC7.36□□□□□ -1.23
NCBP3Q53F19 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC7.36□□□□□ -1.23
NCBP3Q53F19 AC074050.1-201ENST00000563247 211 ntBASIC7.36□□□□□ -1.23
NCBP3Q53F19 AC073308.1-201ENST00000623696 305 ntBASIC7.36□□□□□ -1.23
NCBP3Q53F19 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC7.36□□□□□ -1.23
NCBP3Q53F19 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
NCBP3Q53F19 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NCBP3Q53F19 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NCBP3Q53F19 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NCBP3Q53F19 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
NCBP3Q53F19 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC7.36□□□□□ -1.23
NCBP3Q53F19 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
NCBP3Q53F19 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NCBP3Q53F19 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC7.36□□□□□ -1.23
NCBP3Q53F19 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NCBP3Q53F19 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
NCBP3Q53F19 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NCBP3Q53F19 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC7.35□□□□□ -1.23
NCBP3Q53F19 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
NCBP3Q53F19 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
NCBP3Q53F19 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
NCBP3Q53F19 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NCBP3Q53F19 RN7SKP185-201ENST00000362813 326 ntBASIC7.35□□□□□ -1.23
NCBP3Q53F19 RNU6-1296P-201ENST00000383879 107 ntBASIC7.35□□□□□ -1.23
NCBP3Q53F19 RNU11-201ENST00000387069 134 ntBASIC7.35□□□□□ -1.23
NCBP3Q53F19 AL354714.3-201ENST00000447284 493 ntBASIC7.35□□□□□ -1.23
NCBP3Q53F19 RNA5SP490-201ENST00000517141 136 ntBASIC7.35□□□□□ -1.23
NCBP3Q53F19 AC011602.1-201ENST00000546484 331 ntBASIC7.35□□□□□ -1.23
NCBP3Q53F19 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC7.35□□□□□ -1.23
NCBP3Q53F19 AL360012.1-201ENST00000602813 131 ntBASIC7.35□□□□□ -1.23
NCBP3Q53F19 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NCBP3Q53F19 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms