Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 RNU6-801P-201ENST00000364087 105 ntBASIC5□□□□□ -1.61
CTC1Q2NKJ3 MIR616-201ENST00000385293 97 ntBASIC5□□□□□ -1.61
CTC1Q2NKJ3 SNORA26.5-201ENST00000391215 123 ntBASIC5□□□□□ -1.61
CTC1Q2NKJ3 AL512604.1-201ENST00000404812 257 ntBASIC5□□□□□ -1.61
CTC1Q2NKJ3 RN7SKP267-201ENST00000410381 285 ntBASIC5□□□□□ -1.61
CTC1Q2NKJ3 CYP4F29P-201ENST00000420685 446 ntBASIC5□□□□□ -1.61
CTC1Q2NKJ3 CKS1BP6-201ENST00000424932 240 ntBASIC5□□□□□ -1.61
CTC1Q2NKJ3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC5□□□□□ -1.61
CTC1Q2NKJ3 HMGN2P32-201ENST00000444648 269 ntBASIC5□□□□□ -1.61
CTC1Q2NKJ3 UBE2Q2P9-201ENST00000490086 202 ntBASIC5□□□□□ -1.61
CTC1Q2NKJ3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC5□□□□□ -1.61
CTC1Q2NKJ3 AC091874.1-201ENST00000511402 339 ntBASIC5□□□□□ -1.61
CTC1Q2NKJ3 RNA5SP360-201ENST00000516555 118 ntBASIC5□□□□□ -1.61
CTC1Q2NKJ3 RNU6-58P-201ENST00000517143 103 ntBASIC5□□□□□ -1.61
CTC1Q2NKJ3 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5□□□□□ -1.61
CTC1Q2NKJ3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5□□□□□ -1.61
CTC1Q2NKJ3 AL023881.1-201ENST00000621088 301 ntBASIC5□□□□□ -1.61
CTC1Q2NKJ3 RNA5SP196-201ENST00000625967 102 ntBASIC5□□□□□ -1.61
CTC1Q2NKJ3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5□□□□□ -1.61
CTC1Q2NKJ3 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CTC1Q2NKJ3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5□□□□□ -1.61
CTC1Q2NKJ3 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5□□□□□ -1.61
CTC1Q2NKJ3 DHX9P1-201ENST00000436565 3076 ntBASIC5□□□□□ -1.61
CTC1Q2NKJ3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 RN7SKP280-201ENST00000364196 304 ntBASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 RNU6-1082P-201ENST00000364574 107 ntBASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 RNU6-969P-201ENST00000383900 105 ntBASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 SNORA29-201ENST00000384183 140 ntBASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 RNA5SP44-201ENST00000410446 133 ntBASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 HSPE1P21-201ENST00000438283 308 ntBASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 snoU109.2-201ENST00000459316 135 ntBASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 MIR2116-201ENST00000517221 80 ntBASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 CYCSP40-201ENST00000575927 294 ntBASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 MIR4429-201ENST00000580105 73 ntBASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 AP005019.3-201ENST00000620418 560 ntBASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 AC241585.2-209ENST00000638217 143 ntBASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 TLK1P1-201ENST00000456760 2440 ntBASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CTC1Q2NKJ3 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 AL359837.1-201ENST00000381357 287 ntBASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 AL592291.1-201ENST00000403830 352 ntBASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 RPL26P27-201ENST00000414397 437 ntBASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 RNU4-60P-201ENST00000517239 135 ntBASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 AC090142.3-201ENST00000519012 385 ntBASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 AC018448.1-201ENST00000552843 316 ntBASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 AP001318.4-201ENST00000616637 121 ntBASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 OR14L1P-202ENST00000641545 3009 ntBASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 Z95331.1-201ENST00000623075 23112 ntBASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 AC025031.4-201ENST00000621248 3271 ntBASIC4.98□□□□□ -1.61
CTC1Q2NKJ3 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTC1Q2NKJ3 ZNF137P-201ENST00000456718 1920 ntBASIC4.97□□□□□ -1.61
CTC1Q2NKJ3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTC1Q2NKJ3 AC125257.1-201ENST00000560400 2930 ntBASIC4.97□□□□□ -1.61
CTC1Q2NKJ3 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CTC1Q2NKJ3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTC1Q2NKJ3 RNU6-78P-201ENST00000362897 107 ntBASIC4.97□□□□□ -1.61
CTC1Q2NKJ3 SNORA73.1-201ENST00000363107 205 ntBASIC4.97□□□□□ -1.61
CTC1Q2NKJ3 RNU6-1167P-201ENST00000363227 94 ntBASIC4.97□□□□□ -1.61
CTC1Q2NKJ3 Y_RNA.280-201ENST00000364765 112 ntBASIC4.97□□□□□ -1.61
CTC1Q2NKJ3 SNORD58C-201ENST00000365223 64 ntBASIC4.97□□□□□ -1.61
CTC1Q2NKJ3 MIR34A-201ENST00000385130 110 ntBASIC4.97□□□□□ -1.61
CTC1Q2NKJ3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.97□□□□□ -1.61
CTC1Q2NKJ3 RPS29P17-201ENST00000430795 166 ntBASIC4.97□□□□□ -1.61
CTC1Q2NKJ3 RN7SL558P-201ENST00000497468 299 ntBASIC4.97□□□□□ -1.61
CTC1Q2NKJ3 Y_RNA.692-201ENST00000516627 105 ntBASIC4.97□□□□□ -1.61
CTC1Q2NKJ3 AL161798.1-201ENST00000604630 131 ntBASIC4.97□□□□□ -1.61
CTC1Q2NKJ3 AL391261.4-201ENST00000616012 481 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms