Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.3□□□□□ -2.04
PTCH1Q13635 OR6C5P-201ENST00000452388 923 ntBASIC2.3□□□□□ -2.04
PTCH1Q13635 RPS27AP8-201ENST00000452665 445 ntBASIC2.3□□□□□ -2.04
PTCH1Q13635 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.3□□□□□ -2.04
PTCH1Q13635 AMD1P1-201ENST00000457220 922 ntBASIC2.3□□□□□ -2.04
PTCH1Q13635 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.3□□□□□ -2.04
PTCH1Q13635 RNU6-953P-201ENST00000459154 107 ntBASIC2.3□□□□□ -2.04
PTCH1Q13635 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.3□□□□□ -2.04
PTCH1Q13635 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.3□□□□□ -2.04
PTCH1Q13635 RPL39P36-201ENST00000490784 156 ntBASIC2.3□□□□□ -2.04
PTCH1Q13635 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.3□□□□□ -2.04
PTCH1Q13635 MIR892C-201ENST00000516410 77 ntBASIC2.3□□□□□ -2.04
PTCH1Q13635 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.3□□□□□ -2.04
PTCH1Q13635 AP006587.4-201ENST00000526053 529 ntBASIC2.3□□□□□ -2.04
PTCH1Q13635 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.3□□□□□ -2.04
PTCH1Q13635 AC104581.2-201ENST00000572227 430 ntBASIC2.3□□□□□ -2.04
PTCH1Q13635 MIR3915-201ENST00000578518 97 ntBASIC2.3□□□□□ -2.04
PTCH1Q13635 AC040904.1-201ENST00000590850 223 ntBASIC2.3□□□□□ -2.04
PTCH1Q13635 AL358072.1-201ENST00000604156 575 ntBASIC2.3□□□□□ -2.04
PTCH1Q13635 AC245884.12-201ENST00000615364 59 ntBASIC2.3□□□□□ -2.04
PTCH1Q13635 FRG1KP-201ENST00000623592 341 ntBASIC2.3□□□□□ -2.04
PTCH1Q13635 AL445523.1-201ENST00000451184 1362 ntBASIC2.3□□□□□ -2.04
PTCH1Q13635 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.3□□□□□ -2.04
PTCH1Q13635 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.3□□□□□ -2.04
PTCH1Q13635 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.29□□□□□ -2.04
PTCH1Q13635 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
PTCH1Q13635 RNA5SP325-201ENST00000363756 130 ntBASIC2.29□□□□□ -2.04
PTCH1Q13635 RNY1-201ENST00000364228 113 ntBASIC2.29□□□□□ -2.04
PTCH1Q13635 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.29□□□□□ -2.04
PTCH1Q13635 AL031577.2-201ENST00000404133 280 ntBASIC2.29□□□□□ -2.04
PTCH1Q13635 MIR1323-201ENST00000408090 73 ntBASIC2.29□□□□□ -2.04
PTCH1Q13635 RNU2-62P-201ENST00000410868 191 ntBASIC2.29□□□□□ -2.04
PTCH1Q13635 RNA5SP489-201ENST00000410986 109 ntBASIC2.29□□□□□ -2.04
PTCH1Q13635 AL109913.1-201ENST00000421173 514 ntBASIC2.29□□□□□ -2.04
PTCH1Q13635 BX510359.4-201ENST00000423750 193 ntBASIC2.29□□□□□ -2.04
PTCH1Q13635 RPS3AP44-201ENST00000425466 790 ntBASIC2.29□□□□□ -2.04
PTCH1Q13635 RPL30P4-201ENST00000429309 333 ntBASIC2.29□□□□□ -2.04
PTCH1Q13635 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.29□□□□□ -2.04
PTCH1Q13635 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.29□□□□□ -2.04
PTCH1Q13635 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.29□□□□□ -2.04
PTCH1Q13635 UBE2FP3-201ENST00000436366 524 ntBASIC2.29□□□□□ -2.04
PTCH1Q13635 AC118469.1-201ENST00000442943 488 ntBASIC2.29□□□□□ -2.04
PTCH1Q13635 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.29□□□□□ -2.04
PTCH1Q13635 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.29□□□□□ -2.04
PTCH1Q13635 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.29□□□□□ -2.04
PTCH1Q13635 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.29□□□□□ -2.04
PTCH1Q13635 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.29□□□□□ -2.04
PTCH1Q13635 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.29□□□□□ -2.04
PTCH1Q13635 AC005178.1-201ENST00000508392 440 ntBASIC2.29□□□□□ -2.04
PTCH1Q13635 ATP5EP1-201ENST00000510257 156 ntBASIC2.29□□□□□ -2.04
PTCH1Q13635 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.29□□□□□ -2.04
PTCH1Q13635 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.29□□□□□ -2.04
PTCH1Q13635 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.29□□□□□ -2.04
PTCH1Q13635 RNA5SP220-201ENST00000516298 104 ntBASIC2.29□□□□□ -2.04
PTCH1Q13635 RNU6-678P-201ENST00000516832 109 ntBASIC2.29□□□□□ -2.04
PTCH1Q13635 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.29□□□□□ -2.04
PTCH1Q13635 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.29□□□□□ -2.04
PTCH1Q13635 AC105245.1-201ENST00000581934 244 ntBASIC2.29□□□□□ -2.04
PTCH1Q13635 AC073544.2-201ENST00000601155 540 ntBASIC2.29□□□□□ -2.04
PTCH1Q13635 MTCYBP22-201ENST00000603788 447 ntBASIC2.29□□□□□ -2.04
PTCH1Q13635 AP000811.1-201ENST00000603803 651 ntBASIC2.29□□□□□ -2.04
PTCH1Q13635 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.29□□□□□ -2.04
PTCH1Q13635 AC004223.4-201ENST00000612426 332 ntBASIC2.29□□□□□ -2.04
PTCH1Q13635 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.29□□□□□ -2.04
PTCH1Q13635 AC091931.1-201ENST00000623488 728 ntBASIC2.29□□□□□ -2.04
PTCH1Q13635 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.29□□□□□ -2.04
PTCH1Q13635 AC068137.4-201ENST00000638485 296 ntBASIC2.29□□□□□ -2.04
PTCH1Q13635 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PTCH1Q13635 RNU6-500P-201ENST00000362349 107 ntBASIC2.28□□□□□ -2.04
PTCH1Q13635 RNU4-13P-201ENST00000364019 141 ntBASIC2.28□□□□□ -2.04
PTCH1Q13635 Y_RNA.560-201ENST00000384689 102 ntBASIC2.28□□□□□ -2.04
PTCH1Q13635 VN1R108P-201ENST00000431580 830 ntBASIC2.28□□□□□ -2.04
PTCH1Q13635 MTND4P23-201ENST00000447723 1363 ntBASIC2.28□□□□□ -2.04
PTCH1Q13635 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PTCH1Q13635 ELL2P3-201ENST00000457883 1602 ntBASIC2.28□□□□□ -2.04
PTCH1Q13635 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.28□□□□□ -2.04
PTCH1Q13635 AC082651.2-201ENST00000496833 166 ntBASIC2.28□□□□□ -2.04
PTCH1Q13635 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.28□□□□□ -2.04
PTCH1Q13635 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.28□□□□□ -2.04
PTCH1Q13635 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.28□□□□□ -2.04
PTCH1Q13635 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.28□□□□□ -2.04
PTCH1Q13635 ROCK1P1-201ENST00000573767 549 ntBASIC2.28□□□□□ -2.04
PTCH1Q13635 MIR4419B-201ENST00000577260 68 ntBASIC2.28□□□□□ -2.04
PTCH1Q13635 MIR4782-201ENST00000577987 79 ntBASIC2.28□□□□□ -2.04
PTCH1Q13635 AC112187.2-201ENST00000604345 283 ntBASIC2.28□□□□□ -2.04
PTCH1Q13635 AL022161.1-201ENST00000604390 213 ntBASIC2.28□□□□□ -2.04
PTCH1Q13635 AL031667.3-201ENST00000620124 655 ntBASIC2.28□□□□□ -2.04
PTCH1Q13635 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.27□□□□□ -2.05
PTCH1Q13635 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.27□□□□□ -2.05
PTCH1Q13635 RNA5SP125-201ENST00000364843 120 ntBASIC2.27□□□□□ -2.05
PTCH1Q13635 SNORD48-201ENST00000364953 64 ntBASIC2.27□□□□□ -2.05
PTCH1Q13635 RNU6-1280P-201ENST00000365211 107 ntBASIC2.27□□□□□ -2.05
PTCH1Q13635 AC078974.1-201ENST00000411597 223 ntBASIC2.27□□□□□ -2.05
PTCH1Q13635 MTND1P20-201ENST00000430341 950 ntBASIC2.27□□□□□ -2.05
PTCH1Q13635 MTCYBP39-201ENST00000437562 491 ntBASIC2.27□□□□□ -2.05
PTCH1Q13635 BRK1P2-201ENST00000442875 223 ntBASIC2.27□□□□□ -2.05
PTCH1Q13635 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.27□□□□□ -2.05
PTCH1Q13635 SNORD97-201ENST00000459187 142 ntBASIC2.27□□□□□ -2.05
PTCH1Q13635 DYNLL1P5-201ENST00000467158 270 ntBASIC2.27□□□□□ -2.05
PTCH1Q13635 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms