Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
SMARCB1Q12824 AC103710.2-202ENST00000641454 2853 ntBASIC1.93□□□□□ -2.1
SMARCB1Q12824 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SMARCB1Q12824 RNU6-1159P-201ENST00000362933 107 ntBASIC1.93□□□□□ -2.1
SMARCB1Q12824 RNY4P34-201ENST00000364779 95 ntBASIC1.93□□□□□ -2.1
SMARCB1Q12824 MIR558-201ENST00000384920 94 ntBASIC1.93□□□□□ -2.1
SMARCB1Q12824 MRPL42P2-201ENST00000403169 426 ntBASIC1.93□□□□□ -2.1
SMARCB1Q12824 MIR1294-201ENST00000408503 142 ntBASIC1.93□□□□□ -2.1
SMARCB1Q12824 RNU6-1025P-201ENST00000410629 104 ntBASIC1.93□□□□□ -2.1
SMARCB1Q12824 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.93□□□□□ -2.1
SMARCB1Q12824 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.93□□□□□ -2.1
SMARCB1Q12824 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.93□□□□□ -2.1
SMARCB1Q12824 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.93□□□□□ -2.1
SMARCB1Q12824 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.93□□□□□ -2.1
SMARCB1Q12824 AC104058.1-201ENST00000448028 297 ntBASIC1.93□□□□□ -2.1
SMARCB1Q12824 SNRPGP9-201ENST00000456025 225 ntBASIC1.93□□□□□ -2.1
SMARCB1Q12824 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.93□□□□□ -2.1
SMARCB1Q12824 KLF3P2-201ENST00000465138 268 ntBASIC1.93□□□□□ -2.1
SMARCB1Q12824 DYNLL1P5-201ENST00000467158 270 ntBASIC1.93□□□□□ -2.1
SMARCB1Q12824 RBBP4P6-201ENST00000508098 202 ntBASIC1.93□□□□□ -2.1
SMARCB1Q12824 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.93□□□□□ -2.1
SMARCB1Q12824 AC090572.1-201ENST00000519251 160 ntBASIC1.93□□□□□ -2.1
SMARCB1Q12824 AC010186.2-204ENST00000537668 439 ntBASIC1.93□□□□□ -2.1
SMARCB1Q12824 NACAP3-201ENST00000552100 481 ntBASIC1.93□□□□□ -2.1
SMARCB1Q12824 AL157871.3-201ENST00000557231 293 ntBASIC1.93□□□□□ -2.1
SMARCB1Q12824 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.93□□□□□ -2.1
SMARCB1Q12824 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.93□□□□□ -2.1
SMARCB1Q12824 AC007151.1-201ENST00000572774 483 ntBASIC1.93□□□□□ -2.1
SMARCB1Q12824 NIFKP6-201ENST00000598115 845 ntBASIC1.93□□□□□ -2.1
SMARCB1Q12824 SNRPGP19-201ENST00000603826 189 ntBASIC1.93□□□□□ -2.1
SMARCB1Q12824 AC090578.1-201ENST00000604955 591 ntBASIC1.93□□□□□ -2.1
SMARCB1Q12824 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
SMARCB1Q12824 MIR6134-201ENST00000617606 109 ntBASIC1.93□□□□□ -2.1
SMARCB1Q12824 FRG1KP-201ENST00000623592 341 ntBASIC1.93□□□□□ -2.1
SMARCB1Q12824 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.93□□□□□ -2.1
SMARCB1Q12824 HSPA8P4-201ENST00000511877 1920 ntBASIC1.93□□□□□ -2.1
SMARCB1Q12824 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SMARCB1Q12824 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
SMARCB1Q12824 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.92□□□□□ -2.1
SMARCB1Q12824 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.92□□□□□ -2.1
SMARCB1Q12824 U3.4-201ENST00000363352 213 ntBASIC1.92□□□□□ -2.1
SMARCB1Q12824 RNU6-61P-201ENST00000365528 109 ntBASIC1.92□□□□□ -2.1
SMARCB1Q12824 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SMARCB1Q12824 SNORA20.2-201ENST00000383922 131 ntBASIC1.92□□□□□ -2.1
SMARCB1Q12824 MIR9-3-201ENST00000385084 90 ntBASIC1.92□□□□□ -2.1
SMARCB1Q12824 MIR676-201ENST00000390702 67 ntBASIC1.92□□□□□ -2.1
SMARCB1Q12824 SNORA40.3-201ENST00000390964 122 ntBASIC1.92□□□□□ -2.1
SMARCB1Q12824 RNU2-20P-201ENST00000410425 191 ntBASIC1.92□□□□□ -2.1
SMARCB1Q12824 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.92□□□□□ -2.1
SMARCB1Q12824 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.92□□□□□ -2.1
SMARCB1Q12824 CYCSP49-201ENST00000420810 319 ntBASIC1.92□□□□□ -2.1
SMARCB1Q12824 EIF4EP4-201ENST00000424916 578 ntBASIC1.92□□□□□ -2.1
SMARCB1Q12824 RPS24P1-201ENST00000438550 371 ntBASIC1.92□□□□□ -2.1
SMARCB1Q12824 GAPDHP17-201ENST00000449858 1001 ntBASIC1.92□□□□□ -2.1
SMARCB1Q12824 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.92□□□□□ -2.1
SMARCB1Q12824 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.92□□□□□ -2.1
SMARCB1Q12824 AP001324.2-201ENST00000461163 319 ntBASIC1.92□□□□□ -2.1
SMARCB1Q12824 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.92□□□□□ -2.1
SMARCB1Q12824 HMGB3P17-201ENST00000504195 649 ntBASIC1.92□□□□□ -2.1
SMARCB1Q12824 AC108078.2-201ENST00000510750 236 ntBASIC1.92□□□□□ -2.1
SMARCB1Q12824 RNU6-123P-201ENST00000516163 102 ntBASIC1.92□□□□□ -2.1
SMARCB1Q12824 SNORD19.2-201ENST00000516978 73 ntBASIC1.92□□□□□ -2.1
SMARCB1Q12824 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.92□□□□□ -2.1
SMARCB1Q12824 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.92□□□□□ -2.1
SMARCB1Q12824 AC135279.1-201ENST00000543493 504 ntBASIC1.92□□□□□ -2.1
SMARCB1Q12824 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.92□□□□□ -2.1
SMARCB1Q12824 AC007229.1-201ENST00000590455 412 ntBASIC1.92□□□□□ -2.1
SMARCB1Q12824 DEFB131E-202ENST00000602581 683 ntBASIC1.92□□□□□ -2.1
SMARCB1Q12824 Z94722.1-201ENST00000604328 474 ntBASIC1.92□□□□□ -2.1
SMARCB1Q12824 AL022154.1-201ENST00000604698 785 ntBASIC1.92□□□□□ -2.1
SMARCB1Q12824 AC012409.4-201ENST00000612923 249 ntBASIC1.92□□□□□ -2.1
SMARCB1Q12824 AC091834.1-201ENST00000614543 472 ntBASIC1.92□□□□□ -2.1
SMARCB1Q12824 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.92□□□□□ -2.1
SMARCB1Q12824 AC008250.2-201ENST00000615261 205 ntBASIC1.92□□□□□ -2.1
SMARCB1Q12824 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SMARCB1Q12824 AC093648.1-201ENST00000623546 606 ntBASIC1.92□□□□□ -2.1
SMARCB1Q12824 AC073343.1-201ENST00000328239 651 ntBASIC1.91□□□□□ -2.1
SMARCB1Q12824 FGF7P2-201ENST00000332473 296 ntBASIC1.91□□□□□ -2.1
SMARCB1Q12824 CISD1P1-201ENST00000393907 327 ntBASIC1.91□□□□□ -2.1
SMARCB1Q12824 AL049545.1-201ENST00000401856 572 ntBASIC1.91□□□□□ -2.1
SMARCB1Q12824 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SMARCB1Q12824 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.91□□□□□ -2.1
SMARCB1Q12824 EEF1A1P40-201ENST00000412883 573 ntBASIC1.91□□□□□ -2.1
SMARCB1Q12824 CYCSP48-201ENST00000417124 323 ntBASIC1.91□□□□□ -2.1
SMARCB1Q12824 ISCA1P6-201ENST00000427740 390 ntBASIC1.91□□□□□ -2.1
SMARCB1Q12824 MED13P1-201ENST00000428342 171 ntBASIC1.91□□□□□ -2.1
SMARCB1Q12824 RPL30P4-201ENST00000429309 333 ntBASIC1.91□□□□□ -2.1
SMARCB1Q12824 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.91□□□□□ -2.1
SMARCB1Q12824 MTATP6P16-201ENST00000434543 526 ntBASIC1.91□□□□□ -2.1
SMARCB1Q12824 RPS15AP9-201ENST00000439856 381 ntBASIC1.91□□□□□ -2.1
SMARCB1Q12824 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.91□□□□□ -2.1
SMARCB1Q12824 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.91□□□□□ -2.1
SMARCB1Q12824 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.91□□□□□ -2.1
SMARCB1Q12824 AC011005.2-201ENST00000487324 359 ntBASIC1.91□□□□□ -2.1
SMARCB1Q12824 AC026801.1-201ENST00000497178 464 ntBASIC1.91□□□□□ -2.1
SMARCB1Q12824 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.91□□□□□ -2.1
SMARCB1Q12824 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SMARCB1Q12824 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.91□□□□□ -2.1
SMARCB1Q12824 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.91□□□□□ -2.1
SMARCB1Q12824 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms