Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 RMST_4.1-201ENST00000616886 107 ntBASIC2.27□□□□□ -2.05
SRP54P61011 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.27□□□□□ -2.05
SRP54P61011 AL359740.1-201ENST00000624340 592 ntBASIC2.27□□□□□ -2.05
SRP54P61011 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.27□□□□□ -2.05
SRP54P61011 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.26□□□□□ -2.05
SRP54P61011 MTND5P6-201ENST00000422338 1798 ntBASIC2.26□□□□□ -2.05
SRP54P61011 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SRP54P61011 AL596028.1-201ENST00000326971 197 ntBASIC2.26□□□□□ -2.05
SRP54P61011 MIR21-201ENST00000362134 72 ntBASIC2.26□□□□□ -2.05
SRP54P61011 MIR95-201ENST00000385072 81 ntBASIC2.26□□□□□ -2.05
SRP54P61011 RAP1BP3-201ENST00000407180 549 ntBASIC2.26□□□□□ -2.05
SRP54P61011 RN7SKP158-201ENST00000410453 326 ntBASIC2.26□□□□□ -2.05
SRP54P61011 AL365400.1-201ENST00000431854 640 ntBASIC2.26□□□□□ -2.05
SRP54P61011 AL121890.1-201ENST00000435457 205 ntBASIC2.26□□□□□ -2.05
SRP54P61011 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.26□□□□□ -2.05
SRP54P61011 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.26□□□□□ -2.05
SRP54P61011 AC090515.1-201ENST00000465295 476 ntBASIC2.26□□□□□ -2.05
SRP54P61011 AC068781.1-201ENST00000488231 618 ntBASIC2.26□□□□□ -2.05
SRP54P61011 AC140059.1-201ENST00000489238 361 ntBASIC2.26□□□□□ -2.05
SRP54P61011 CKS1BP2-201ENST00000497342 240 ntBASIC2.26□□□□□ -2.05
SRP54P61011 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.26□□□□□ -2.05
SRP54P61011 YWHAEP4-201ENST00000505390 198 ntBASIC2.26□□□□□ -2.05
SRP54P61011 SNORD27.1-201ENST00000516319 72 ntBASIC2.26□□□□□ -2.05
SRP54P61011 Y_RNA.687-201ENST00000516558 91 ntBASIC2.26□□□□□ -2.05
SRP54P61011 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.26□□□□□ -2.05
SRP54P61011 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.26□□□□□ -2.05
SRP54P61011 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.26□□□□□ -2.05
SRP54P61011 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.26□□□□□ -2.05
SRP54P61011 AL138976.2-201ENST00000563989 694 ntBASIC2.26□□□□□ -2.05
SRP54P61011 MIR4648-201ENST00000580107 72 ntBASIC2.26□□□□□ -2.05
SRP54P61011 CLIC4P2-201ENST00000601934 717 ntBASIC2.26□□□□□ -2.05
SRP54P61011 AL121917.1-203ENST00000605534 577 ntBASIC2.26□□□□□ -2.05
SRP54P61011 MIR98-201ENST00000606724 119 ntBASIC2.26□□□□□ -2.05
SRP54P61011 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.26□□□□□ -2.05
SRP54P61011 AC093788.1-201ENST00000609356 927 ntBASIC2.26□□□□□ -2.05
SRP54P61011 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
SRP54P61011 MIR6873-201ENST00000622788 63 ntBASIC2.26□□□□□ -2.05
SRP54P61011 U6.114-201ENST00000636407 96 ntBASIC2.26□□□□□ -2.05
SRP54P61011 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
SRP54P61011 U3.4-201ENST00000363352 213 ntBASIC2.25□□□□□ -2.05
SRP54P61011 SNORA3A-201ENST00000364113 130 ntBASIC2.25□□□□□ -2.05
SRP54P61011 RNU6-74P-201ENST00000384235 107 ntBASIC2.25□□□□□ -2.05
SRP54P61011 SNORA51.11-201ENST00000384442 131 ntBASIC2.25□□□□□ -2.05
SRP54P61011 RNU1-148P-201ENST00000384472 162 ntBASIC2.25□□□□□ -2.05
SRP54P61011 RNU1-57P-201ENST00000384491 166 ntBASIC2.25□□□□□ -2.05
SRP54P61011 MIR454-201ENST00000390180 115 ntBASIC2.25□□□□□ -2.05
SRP54P61011 OR6C66P-201ENST00000414917 930 ntBASIC2.25□□□□□ -2.05
SRP54P61011 RPL21P90-201ENST00000415692 466 ntBASIC2.25□□□□□ -2.05
SRP54P61011 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.25□□□□□ -2.05
SRP54P61011 TOMM20P4-201ENST00000427861 435 ntBASIC2.25□□□□□ -2.05
SRP54P61011 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.25□□□□□ -2.05
SRP54P61011 WARS2P1-201ENST00000429678 537 ntBASIC2.25□□□□□ -2.05
SRP54P61011 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.25□□□□□ -2.05
SRP54P61011 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.25□□□□□ -2.05
SRP54P61011 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SRP54P61011 AL161788.1-201ENST00000441805 169 ntBASIC2.25□□□□□ -2.05
SRP54P61011 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.25□□□□□ -2.05
SRP54P61011 AC090255.1-201ENST00000495779 349 ntBASIC2.25□□□□□ -2.05
SRP54P61011 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.25□□□□□ -2.05
SRP54P61011 AC104806.1-201ENST00000508720 308 ntBASIC2.25□□□□□ -2.05
SRP54P61011 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.25□□□□□ -2.05
SRP54P61011 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.25□□□□□ -2.05
SRP54P61011 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.25□□□□□ -2.05
SRP54P61011 MTCYBP33-201ENST00000575007 1130 ntBASIC2.25□□□□□ -2.05
SRP54P61011 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.25□□□□□ -2.05
SRP54P61011 AC073410.2-201ENST00000603240 332 ntBASIC2.25□□□□□ -2.05
SRP54P61011 AL713866.2-201ENST00000603579 219 ntBASIC2.25□□□□□ -2.05
SRP54P61011 AL355297.2-201ENST00000604792 129 ntBASIC2.25□□□□□ -2.05
SRP54P61011 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.25□□□□□ -2.05
SRP54P61011 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.25□□□□□ -2.05
SRP54P61011 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.24□□□□□ -2.05
SRP54P61011 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.24□□□□□ -2.05
SRP54P61011 AP000568.1-201ENST00000282964 442 ntBASIC2.24□□□□□ -2.05
SRP54P61011 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
SRP54P61011 U8.8-201ENST00000365399 135 ntBASIC2.24□□□□□ -2.05
SRP54P61011 UBE2V1P10-201ENST00000414685 269 ntBASIC2.24□□□□□ -2.05
SRP54P61011 AC138623.1-201ENST00000418060 216 ntBASIC2.24□□□□□ -2.05
SRP54P61011 C1DP2-201ENST00000418167 426 ntBASIC2.24□□□□□ -2.05
SRP54P61011 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.24□□□□□ -2.05
SRP54P61011 AC098862.1-201ENST00000504991 413 ntBASIC2.24□□□□□ -2.05
SRP54P61011 SNORA48.11-201ENST00000517015 89 ntBASIC2.24□□□□□ -2.05
SRP54P61011 OR5AL2P-201ENST00000532185 920 ntBASIC2.24□□□□□ -2.05
SRP54P61011 SNRPGP18-201ENST00000553000 214 ntBASIC2.24□□□□□ -2.05
SRP54P61011 AC026464.5-201ENST00000562497 722 ntBASIC2.24□□□□□ -2.05
SRP54P61011 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.24□□□□□ -2.05
SRP54P61011 AC006566.1-201ENST00000608943 513 ntBASIC2.24□□□□□ -2.05
SRP54P61011 AC008121.3-201ENST00000618726 433 ntBASIC2.24□□□□□ -2.05
SRP54P61011 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SRP54P61011 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.24□□□□□ -2.05
SRP54P61011 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
SRP54P61011 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
SRP54P61011 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SRP54P61011 RNU6-622P-201ENST00000384272 103 ntBASIC2.23□□□□□ -2.05
SRP54P61011 SNORD116-20-201ENST00000384529 92 ntBASIC2.23□□□□□ -2.05
SRP54P61011 U3.40-201ENST00000408706 208 ntBASIC2.23□□□□□ -2.05
SRP54P61011 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.23□□□□□ -2.05
SRP54P61011 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.23□□□□□ -2.05
SRP54P61011 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.23□□□□□ -2.05
SRP54P61011 HMGN2P38-201ENST00000423806 265 ntBASIC2.23□□□□□ -2.05
SRP54P61011 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms